Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0544 ATGAGCGACAACATGAACAGCTTCATGCCATTCTCAGGGGCTAGGAGGACAGGTTTTAGAGCCTATGATTCTCAGTCTTTCAATCATAGTGATGCCAATGAAGATGAAAGGAATTCAAGTGAAATAGATCCATGGCGGTTGCGGGAAGATAGAACTCCTACTGGATTCCACAGCATACCATTTTTTCCAGGACAACCACATATAAGGCAACAAACTTATGTTCCCCATAATGGAAACATGGAAAGGATTTTCAACCCAAGGCTCAGAGAGATCTTCCAGCACTCACCTCCAAGATTCACATTCCAAACAAACACACAAGTTGTTCCTCCAGTGATAGAAAATTCCAAATCAACAGTTTTGAGCAAGCTTAAGAAAGAAGTCTATAACCCCACCCCAAAGCTGTTATCCAGGAATTTGAGCTTATATTATAGAGATAAATACAATAGAGTAAATGGTTTGACAGAGAGGAAGAAAGATAATGATGAAGATGGTAAGAGGTGTGCTATTTGCTTGGAAGATTTTGAGCCTAAAGAGGAAGTGATGACCACTCCATGCAAACACATGTTCCATGAGGATTGCATAGTGCCTTGGTTAACAAGCCATAGTCAGTGCCCAGTTTGTAGGTTTGTGATTAGTGAGACAGTGAGAGGGAACCCTTCATCATTCAACAACAATGATAACATCAGTTTGGAACCCAATGACCAGATTGATGGAGAGCTTTTGTCAATTTTGAGGGCCATGGAAGAAGCTTTTCACTTGACTAGTCACTAA 771 0.4086 MSDNMNSFMPFSGARRTGFRAYDSQSFNHSDANEDERNSSEIDPWRLREDRTPTGFHSIPFFPGQPHIRQQTYVPHNGNMERIFNPRLREIFQHSPPRFTFQTNTQVVPPVIENSKSTVLSKLKKEVYNPTPKLLSRNLSLYYRDKYNRVNGLTERKKDNDEDGKRCAICLEDFEPKEEVMTTPCKHMFHEDCIVPWLTSHSQCPVCRFVISETVRGNPSSFNNNDNISLEPNDQIDGELLSILRAMEEAFHLTSH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0544 256 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 3 255 - -
Lan7g0544 256 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 3 255 - -
Lan7g0544 256 SUPERFAMILY RING/U-box 159 215 - -
Lan7g0544 256 MobiDBLite consensus disorder prediction 25 45 - -
Lan7g0544 256 Pfam Ring finger domain 166 208 IPR001841 -
Lan7g0544 256 MobiDBLite consensus disorder prediction 29 45 - -
Lan7g0544 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 217 IPR013083 -
Lan7g0544 256 ProSiteProfiles Zinc finger RING-type profile. 167 208 IPR001841 -
Lan7g0544 256 CDD RING-H2_PA-TM-RING 167 208 - -
Lan7g0544 256 SMART ring_2 167 207 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0544 Lan-Chr7 4000963 4003243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0544 67 251 C3H Transcription Factor Family AT3G58720 44.103 3.23e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0544 - K11982 gmx:100810607 287.345