Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0541 ATGATGTCCAGGTCGTATACAAATCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCAATGGGGAATCAGTTTAAGGAAAGGAAGCGGTTGTCAAGAGTTATGAGTGTTCCAGGGATTGTCTCAGAATTGGATGATGATCAGGCTGTCAGTATTTCTTCTGATAATCCGTCGACTATTTCTACTGATAGAATGATCATTGTAGCAAACCAGCTACCTTTGAAAGCAAAGCGAAGAGAGGACAATAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCCTTGCTTTTACAGCTTAAGGATGGACTTCCGGACGAAATGGAGGTTCTGTATGTTGGGTCTCTGCGAGTTGATATTGACCCGGCTGAACAGGATGATGTGTCACAGTATCTGTTGGACAAATTCAAATGTGTCCCAACTTTTCTACCCTCTGATGTTTTGGAGAAATTTTATGATGGCTTCTGTAAAAAGCAGTTATGGCCACTTTTTCATTATATGTTACCGTTCACAACAAATGAAAGCCACCGTTTTGGCCGCTCAATGTGGGAATCCTATGTGCTGGCAAATAAGTTGTTCTTTCAGAAGGTGGTTGAAATAATAAACCCAGAGGATGATTATATTTGGGTTCATGATTACCATTTGATGGTGCTGCCAACCTTTATAAGAAGGCGCTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCATCAGAGATATATAGGACCCTTCCTGTCAGGGAAGAGATACTTAAAGCTTTACTAAACTCTGATATCATTGGATTCCATACCTTTGACTATGCCCGTCATTTCCTCTCCTGTTGCAGTCGTATGTTGGGTTTGGAATACCAGTCGAAAAGGGGCTATTTAGGATTGGAATACTATGGAAGGACTATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGTCGAATTGAATCTGTCATGAGAATGGCCGATGAGGAGTCCAAGGTTAGGGAGATCAAACAGCAATTCGAAGGAAAAACCATCTTGCTTGGTGTTGACGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAACAGATGCTCAAACAACACCCGAAATGGCAAGGAAGATCTGTTCTTGTCCAGATAGTTAATCCTGCCAGGGGTAAAGGGATACATCTAGAGGAGATACATGCCGAAATACAAGAAAGCTCCAGCAGGATCAACAGAGTATATGGGCGGCCTGGTTATGAACCTATTGTTTTTATTGATAGATCGGTTTCAATTGCTGAAAAAGTTGCCTATTACAGCATGGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGGTTCTGAATCATCCTCCAATGCTAGCATCCCAAAGAAGAGTATGTTAGTAGTATCAGAGTTTATTGGATGTTCTCCATCACTTAGTGGGGCTATTCGTATCAATCCATGGAATGTTGAAGCAACTGCAGAAGCAATGAATGAGGCCATATCAATGAGCGAAGGAGAGAAACAGTTACGGCATGAAAAGCATTACCGATATGTCAGCACTCACGATGTGGCTTACTGGTCTCGTAGTTTCTTGCAAGACATGGAAAGGGCTTGCACAGACCTTCTAAGGAAAAGATGTTGGGGAATAGGGCTTAGCTTTGGATTTAGGGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCCACTGATACTATGGTTTCAGCTTACATGAGGGCAAGGAATAGGGCTATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATCAATAAAAGTCCTAGCAAGGAGGTAATCACTCTTTTGGAAACACTCTGCGCAGACCCCAAAAATGTTGTTTTTATTGTTAGTGGAAGGGGGAGGGCTAGTTTAAGCCAGTGGTTTACACCCTGCAAAAAACTTGGAGTTGCTGCAGAACACGGGTACTTCTTGAGATGGTCACAGAGTGAAGATTGGGAAATTTGTGGCAAGAGCACCGAATTTGGATGGATGCAGATTGCTGAACCTGTAATGAATCTGTATACAGAGGCAACTGATGGTTCCAGCATTGAAAAGAAGGAAAGTGCTTTGGTCTGGCAATACCGGGATGCTGATCTTGGTTTTGGATCTGCTCAGGCCAAGGAAATGTTAGATCATCTTGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGCCAAGAGTGGCCAGTTCATTGTTGAAGTGAAGCCCCAGGATGTAAGCAAGGGTTTAGTTGCTGAAAAAATATTTTCATCAATGGCTGAGAAGGGCACACAAGCTGACTTTGTGCTATGTGTTGGTGATGACAGATCAGATGAAGATATGTTTGAAGTAATTAGTAGTGCAATCTCAAGAAATATTCTTTCCTCCAAGGCTTCTGTTTTTGCATGCACGGTTGGACAAAAACCAAGCAAAGCTAAGTATTATCTGGATGATACTTCTGAAGTAATAAACATGCTGCAATCTTTGGCTGAAGAATCAGATTCTTCACCATCATGCATAGAAGAAGAAACTGGGGATTCCTCTCTAAGGCAAATGTAA 2592 0.4167 MMSRSYTNLLDLASGNFPAMGNQFKERKRLSRVMSVPGIVSELDDDQAVSISSDNPSTISTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDEMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPSDVLEKFYDGFCKKQLWPLFHYMLPFTTNESHRFGRSMWESYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEESKVREIKQQFEGKTILLGVDDMDIFKGINLKILAMEQMLKQHPKWQGRSVLVQIVNPARGKGIHLEEIHAEIQESSSRINRVYGRPGYEPIVFIDRSVSIAEKVAYYSMAECVIVTAVRDGMNLTPYEYIACRQGISGSESSSNASIPKKSMLVVSEFIGCSPSLSGAIRINPWNVEATAEAMNEAISMSEGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSTDTMVSAYMRARNRAILLDYDGTVMPQNSINKSPSKEVITLLETLCADPKNVVFIVSGRGRASLSQWFTPCKKLGVAAEHGYFLRWSQSEDWEICGKSTEFGWMQIAEPVMNLYTEATDGSSIEKKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQDVSKGLVAEKIFSSMAEKGTQADFVLCVGDDRSDEDMFEVISSAISRNILSSKASVFACTVGQKPSKAKYYLDDTSEVINMLQSLAEESDSSPSCIEEETGDSSLRQM* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0541 863 MobiDBLite consensus disorder prediction 843 863 - -
Lan7g0541 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 854 IPR001830 GO:0003824|GO:0005992
Lan7g0541 863 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 854 - -
Lan7g0541 863 Gene3D Glycogen Phosphorylase B; 317 530 - -
Lan7g0541 863 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Lan7g0541 863 Gene3D Glycogen Phosphorylase B; 56 316 - -
Lan7g0541 863 SUPERFAMILY HAD-like 593 841 IPR036412 -
Lan7g0541 863 TIGRFAM T6PP: trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Lan7g0541 863 Pfam Trehalose-phosphatase 596 831 IPR003337 GO:0003824|GO:0005992
Lan7g0541 863 Gene3D - 721 851 IPR023214 -
Lan7g0541 863 Gene3D - 592 691 IPR023214 -
Lan7g0541 863 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Lan7g0541 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Lan7g0541 863 CDD HAD_TPP 594 835 - -
Lan7g0541 863 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 595 798 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0541 Lan-Chr7 3982131 3986304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0541 1 853 Trehalose Biosynthesis Gene Families AT1G06410 75.733 0.0 1367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0541 K16055 - gmx:100800847 1563.13