Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0520 ATGAGCCAACACCAATACTTCAAAGGCAAAATTTCCAACCAAATCGAACAAACACAGGATAATACTTTGAACCGAACCATAGAACATACAAAGCATAACGGAGGAACAATGGGGATGAGGAACACTGGGGGAGAGATTGTTCAAGTAGAAGGAGGCCACATTATTCGATCCACAAATCGAAAAGATCGTCACAGCAAGGTTTACACATCAAAAGGTCCTCGCGATCGAAGGGTTAGACTATCAGCCCACACAGCCATTGAATTCTATGATGTTCAAGACCGTCTTGGCTATGACCGACCCAGCAAGGCCGTGGACTGGCTCATCAAGAAGGCGAAGCCTTCAATTGACAAGCTTGCTGAGCTTCCTCCATGGAATCCAACTTCAGTGGAAGAGCACAATGCAGGTTCAAGTGACATGAGTCACATGACTAATGCAAAACAATCAGAGTCTTGTGGTTATAATTTTCAGCTCCAAAGGCAACTAGGTGAGACTGAGAACTCTGATAAGCATTCAGCTTTAGCCTTCATTCAACCACACATGGATACTACTGACCCTATAGCTTTATTTCCAACGACTCCGGCAACTTCCTCTTTCAATTTTCAAAGCTACCCTCCTGATATAATCTCTAGAGCCAACAATTCCTCACAAGATCTTGGCCTCTCTCTTCATTCCTTCCACAACCACACAGGTCTGATTCTTGGGCAATCACAACAAGCTGCAGTAGCAAATCAAACACCTTCGAGTGAAGAACACCAAAGCCTTTTTGTTGGCTCGGCTCCCGTTGGGTTTGAGAACCACTACCAGAGGATTATGGATTGGAACAACGAAGCATTCATGGTTAACTCACACCAATTTCTAGGCCAAGGTAATTCAGGATCAGCATATTCTCAAAGTGGGACCACCCTTCAGTCCAATTTTTCACCATTAGTTCGTTCTTGGAACGACATTCCAATGAATTCCTCAGAACATCAAAGGTCCCAAAATGCTTCAATCTTTGGCAGCAGGTTTCTGTCTGATCATGGATTAGCAGGGTTCAGCATTCAGGAAGCGAATCATAGAGATGATACCAACAACCCATCTCCTTCTCATCCTAATTCTCACCACTGA 1107 0.4408 MSQHQYFKGKISNQIEQTQDNTLNRTIEHTKHNGGTMGMRNTGGEIVQVEGGHIIRSTNRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPSIDKLAELPPWNPTSVEEHNAGSSDMSHMTNAKQSESCGYNFQLQRQLGETENSDKHSALAFIQPHMDTTDPIALFPTTPATSSFNFQSYPPDIISRANNSSQDLGLSLHSFHNHTGLILGQSQQAAVANQTPSSEEHQSLFVGSAPVGFENHYQRIMDWNNEAFMVNSHQFLGQGNSGSAYSQSGTTLQSNFSPLVRSWNDIPMNSSEHQRSQNASIFGSRFLSDHGLAGFSIQEANHRDDTNNPSPSHPNSHH* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0520 368 MobiDBLite consensus disorder prediction 122 144 - -
Lan7g0520 368 Pfam TCP family transcription factor 59 160 IPR017887 -
Lan7g0520 368 PANTHER TRANSCRIPTION FACTOR TCP4 37 368 - -
Lan7g0520 368 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 368 IPR005333 GO:0003700
Lan7g0520 368 MobiDBLite consensus disorder prediction 129 144 - -
Lan7g0520 368 ProSiteProfiles TCP domain profile. 60 118 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0520 Lan-Chr7 3809526 3812205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0520 44 315 TCP Transcription Factor Family AT3G15030 41.896 1.33e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan7g0520 TCP 7.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0520 - - lang:109351858 721.079