Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0497 ATGCGAAACCCAATTTCATCCTCAATGGCTGTGAAAGAGAGAAAGTGTGAGAAGAACAATGAGAAACCTAACAATAACGTTATCGAGCCTCATTTCCGCGGCGTACGGAAGCGACCATGGGGTCGTTACGCCGCTGAGATCAGAGATCCTGGCAAGAAAAGCCGTGTCTGGCTCGGAACATTTGACACCGCCGAAGAAGCTGCAAGAGCCTACGACAAAGCTGCTAGACAGTTCCGTGGTCCAAAGGCCAAAACCAACTTCCCTTCAGAACTCAACAACAATGAAAACCGTCAAAACAATAACAATCGTAGCCCTAGCCAGAGCAGCACCGTCGAATCCTCCACCCCGGAGCGTGAGATCACGCCCCGTCGTGACATCAATATGGATCGTTTTCCGTTTCTTCCTCTGCAGCCGTCAGCGCCGCAGATCATGGCGTTCGGATGTGGGGCTGCTGCGGTTGAGGGCATGTTAACTGCTGCACCTGGGAACCCTGTTTTCTTTATGGGTCAGCGTTTTCCTGTCCGATTCGAACCGGTTCCTGTGTTGTTTAGCAACGGGTTTGGCGGTGGGGCCCAGAGTGACTCAGATTCATCCTCTGTCGTTGATTGTCAGCAACCAAAGCGAACTCTCAATCTTGATCTTAACCTCGCTCCACCCATGGATTGTTGA 669 0.5157 MRNPISSSMAVKERKCEKNNEKPNNNVIEPHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDKAARQFRGPKAKTNFPSELNNNENRQNNNNRSPSQSSTVESSTPEREITPRRDINMDRFPFLPLQPSAPQIMAFGCGAAAVEGMLTAAPGNPVFFMGQRFPVRFEPVPVLFSNGFGGGAQSDSDSSSVVDCQQPKRTLNLDLNLAPPMDC* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0497 222 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Lan7g0497 222 CDD AP2 30 88 IPR001471 GO:0003700|GO:0006355
Lan7g0497 222 Pfam AP2 domain 30 80 IPR001471 GO:0003700|GO:0006355
Lan7g0497 222 MobiDBLite consensus disorder prediction 1 32 - -
Lan7g0497 222 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Lan7g0497 222 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 207 - -
Lan7g0497 222 MobiDBLite consensus disorder prediction 76 126 - -
Lan7g0497 222 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700|GO:0006355
Lan7g0497 222 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Lan7g0497 222 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Lan7g0497 222 MobiDBLite consensus disorder prediction 86 116 - -
Lan7g0497 222 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Lan7g0497 222 PANTHER ERF DOMAIN PROTEIN 9-RELATED 19 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0497 Lan-Chr7 3663647 3664655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0497 29 220 AP2-EREBP Transcription Factor Family AT5G44210 43.333 9.61e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan7g0497 AP2 1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0497 K09286 - gmx:100801924 198.364