Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0496 ATGAGTAGTGTGGGTGCAGAGCAACACAAGTTTCAACCCTCCCACCAACTTTTGTCCCTTAAGAAATCTCTTAGGGACATTGACATCCCACCAAGGAAACTCCTCACTCGCCGTGCCGCCGCCGCCACATACGATGGCGCCGCCGATATGTATTCAGATGAAACCTTTTTCCAAAAGTATCTCCCCCATAACAACATGAATATTATTGTTGATGAGTCTGATGATGATGATTCTGACCCTTACTCATCGGATCACTTTCGCATGTATGAGTTCAAGGTGCGGAAGTGCACTCGCAGCCGCAGCCACGACTGGACTGACTGTCCTTTTGCTCACCCCGGCGAGAAGGCTCGCCGGCGTGATCCCAAACGCTACCGTTACTCTGGTAGCGTCTGTCCTGAGTATCGCCGTGGCGGCGGGTCATGCAGCCGTGGTGATACATGTGAGTTTTCTCACGGGGTTTTTGAGTGCTGGTTGCACCCTGATAGGTATAGAACAGAAGCTTGCAAGGATGGTAAGAATTGTAAGAGGAAAGTGTGCTTCTTTGCACACACCCCTCGCCAAATTAGGGTTCTACCCGTAAACTCACATACTACTAGTTCAAATGAAATCATGAATTCATGCAAAAATAATAACAAGAATAGCAAGTTCTTGAACCCTTCGAATATTAAACACTCTTGTTTGTTTTGTCATTGTAATTCTTGTGTTTCCACTTGTTCACCAACTTCTACTTTGTTTGGTATGTCTCGTTTTTTCTCTCCTCCAATGTCACCTTCTTCTCCTGCTTCTCCTGCAAATGGGGTTTCACCTTTGTCTAGGTATGTAGGATCTGAAAAATCCCATCATGGGGTTGGTGTCCTTAGCTATAAGGGCATGCTTAATGAACTCAGGTATTCCTTGGAGGGTCTGAATTATAATGAGGCTAATAATAATTCTCCGGTTTCTTCTGCTTCCAATGTACAGAAGAATCTGAATTGGCTTGTTGATGGTTCTATCAACTGTGAAGATCAACAGCGTTTTGTTCTTTCTCCTTCTTCTGCTCCTTCCTCGGATTTTGGAAACTTCAACAATGGAAGATATTCAACCAGCAAGATTTTGAAGAATGAGGCAAAGTTTATTGATGATGTCAATGCCCCGGATCTCGGGTGGGTGAATGAATTGCTCATGTAG 1167 0.4464 MSSVGAEQHKFQPSHQLLSLKKSLRDIDIPPRKLLTRRAAAATYDGAADMYSDETFFQKYLPHNNMNIIVDESDDDDSDPYSSDHFRMYEFKVRKCTRSRSHDWTDCPFAHPGEKARRRDPKRYRYSGSVCPEYRRGGGSCSRGDTCEFSHGVFECWLHPDRYRTEACKDGKNCKRKVCFFAHTPRQIRVLPVNSHTTSSNEIMNSCKNNNKNSKFLNPSNIKHSCLFCHCNSCVSTCSPTSTLFGMSRFFSPPMSPSSPASPANGVSPLSRYVGSEKSHHGVGVLSYKGMLNELRYSLEGLNYNEANNNSPVSSASNVQKNLNWLVDGSINCEDQQRFVLSPSSAPSSDFGNFNNGRYSTSKILKNEAKFIDDVNAPDLGWVNELLM* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0496 388 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 129 152 IPR000571 GO:0046872
Lan7g0496 388 SMART c3hfinal6 125 153 IPR000571 GO:0046872
Lan7g0496 388 SMART c3hfinal6 162 185 IPR000571 GO:0046872
Lan7g0496 388 PANTHER UNKEMPT FAMILY MEMBER 26 387 IPR045234 -
Lan7g0496 388 Gene3D - 120 195 - -
Lan7g0496 388 ProSiteProfiles Zinc finger C3H1-type profile. 125 154 IPR000571 GO:0046872
Lan7g0496 388 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 26 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0496 Lan-Chr7 3652439 3654093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0496 34 189 C2H2 Transcription Factor Family AT5G07500 51.592 8.53e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan7g0496 zf-CCCH 1.3e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0496 K23047 - gmx:100787049 380.178