Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0493 ATGGTGTGTTTGGGGTTTGATATGGTTCAAAGGTTGGAACTTTGCTTGGTCAAGTGGAGGATTACATTTGGGTGGTGTGTGTTTCTGTTGTTTCTTAGTCCAGTGGTGGGTTTGAGACCCTTAAGGGACAGAACTGGCAAATGGGGCGATGAGTGGCTTTTTTCAAGAAGAGACGAAAGTGACATAGGTCCATTTTCCCAATGGAACATAACCGGAACTTACAGAGGGACTTGGAAATTGCTAGATATCACAAATGGCTCTTCCAAATACCCAGACATTAGAAAAACAAATGGGAATTCTGTAATTGAGTTGGCTAGCACACCCACAAAGATAACTGGTGTCCATTATGTGCATGGGATAGTTATATTCCATGATGTGTTTGACAAAGAATACAATGTTGGTGGTGCCCAAATCAGAATAGAAGGTGTATATATATGGCCTTTTAGACAGCTTCGAATGATAACCAACAGTGGAAAAGGAGGGTTGGATCAGGATGATGATTTTCTATTATCTAATCCATATCATCTGCTTGGAGTTTTCTCATCTCAAGTATTCCAAGAATCTTCACGAGATAAGACGTGGAGAAGAAAATCTTCTCTACTGCATGACTTGGAGAAACATTGTAATGTTGAAATTGCTGCAAAGGTTTCACGTTTGCCATCATCAAAACACGAAGGGGCGCGTGATTCTTTTCACCTAGAAGGGTTAGTGGAGAGTCCATTGGTGGATGATGATGGATATTGCTTCTCTCCTTTGCAGTTCAATGCATCATCCATTAATGTTGAAGCTTACTATAATAAAGCAGTGAACTACACATTGATGGTTACTTTTCTCTCTTTCTTGCAAGTTCTTCTATTGATTCGGCAGATGGAGCACAGCAACACTCAATCTGGGGCTGCTAAGGTTTCAATAGTGATGGTTGGCCAACAAGCTATTCTGGATGCTTATCTCTGTCTTTTACATCTCACTGCAGGAATACTGGTCGAATCGTTGTTTAATGCCTTTGCAACTGCTGCATTTTTCAAGTTTGTGGTTTTTTCAATATTTGAGATGAGATATCTTCTTGCCATCTGGAGGGCAACTAGGCCTTTGAGTAACGGGGAAGGTTGGGAGACAATGAGGCGTGAGCTATCAGTTTTATACAGCCGTTTCTATGGGGTCCTATTAGGAGGCATTCTGCTCATGTATGAGTTCCATTATTATTTAAGACCCATTCTTCTTCTCGCATACTCCTTTTGGATACCTCAGATAATCACCAATGTTGTTCGTGATTCACGCAAACCATTGCACCCTCATTATATCATAGGCATGACTGTTACTCGGCTAGCAGTCCCATTATATATTTTTGGTTGTCCTAACAACTTCATGCGAATAGAATCAGACCAGAAGTGGTGTGTTTATTTGGCTATACTTATTGGACTTCAAGCTGTGATTCTTCTACTTCAGCACTACCTTGGCTCCCGTTGGTTCATTCCTCATCAGATTCTACCTGAGAAATACAGCTATTGTAGGAGGTTTGCTCAAGATACAAGTCATGCTGCAGATTGTGTTATTTGCATGGCAGCCATTGATCTTAGTCAGCGGTCTAATGATTGCATGGTGACACCTTGTGATCATTTCTTCCACTCTGGCTGTTTACAAAGATGGATGGATATAAAGATGGAGTGCCCAACTTGTCGGCGCCCGCTTCCACCGGCCTGA 1701 0.4162 MVCLGFDMVQRLELCLVKWRITFGWCVFLLFLSPVVGLRPLRDRTGKWGDEWLFSRRDESDIGPFSQWNITGTYRGTWKLLDITNGSSKYPDIRKTNGNSVIELASTPTKITGVHYVHGIVIFHDVFDKEYNVGGAQIRIEGVYIWPFRQLRMITNSGKGGLDQDDDFLLSNPYHLLGVFSSQVFQESSRDKTWRRKSSLLHDLEKHCNVEIAAKVSRLPSSKHEGARDSFHLEGLVESPLVDDDGYCFSPLQFNASSINVEAYYNKAVNYTLMVTFLSFLQVLLLIRQMEHSNTQSGAAKVSIVMVGQQAILDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWRATRPLSNGEGWETMRRELSVLYSRFYGVLLGGILLMYEFHYYLRPILLLAYSFWIPQIITNVVRDSRKPLHPHYIIGMTVTRLAVPLYIFGCPNNFMRIESDQKWCVYLAILIGLQAVILLLQHYLGSRWFIPHQILPEKYSYCRRFAQDTSHAADCVICMAAIDLSQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0493 566 SMART ring_2 516 559 IPR001841 -
Lan7g0493 566 SMART ringv_2 515 560 IPR011016 GO:0008270
Lan7g0493 566 ProSiteProfiles Zinc finger RING-type profile. 516 560 IPR001841 -
Lan7g0493 566 SUPERFAMILY RING/U-box 515 565 - -
Lan7g0493 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 502 566 IPR013083 -
Lan7g0493 566 PANTHER RING ZINC FINGER PROTEIN 10 566 - -
Lan7g0493 566 Pfam Ring finger domain 515 560 IPR001841 -
Lan7g0493 566 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 10 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0493 Lan-Chr7 3615364 3622840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0493 516 563 C3H Transcription Factor Family AT4G12190 37.500 1.87e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0493 K23788 - gmx:100802452 970.304