Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0489 ATGGGTTCCATATGTTCTAAGAGTTCAGCTGTGGAAGACAGCAATGAAAGTATCACAAATAAATTGTCATCATCTAGCAAAAGGTCCGCAGAGTTGAATTCTTTGCGATTGAATTCCTCAAAAAGAGTTGAGGCGGTTCGGGTGAAAGATAAGGTATTAAATAGTCAACGCAGTGATGTGAAAGTTTCATTAGTTAACAAGAAAGCCAATGGTTCAGTGAAATTGTATGAGGTCCAAAATGGGATGAATAAAATAGAGAAAGCTGGATTGACTGTTATTGATCATCCTAGTTTTGGAAGGATTCCAAAGGCTGTTGAAGGAGAGCAAGTTGCAGCAGGATGGCCGGCTTGGCTTTCTTCTGTTGCCGGTGAGGCTGTCAAGGGATGGTTGCCTAGGAGTGCCAACACTTTTGAGAGGTTACATAAAATTGGGCAAGGAACTTATAGCACCGTTTATAAAGCACGTGATGTAACTAACCAAAGGATTGTTGCTTTGAAGAGGATACGCTTTGATAATCTTGATCCTGAGAGTGTCAAATTTATGGCAAGGGAGATCCATGTTCTGCGTAAGCTCGACCATCCAAACATAATAAAGTTGGAGGGCTTGATAACGTCATCGACATCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAACATGATCTTACAGGACTTGCATCAAATCCTGCCATTAAGTTCTCTGAACCTCAGCTGAAATGCTATATGCAGCAACTTCTTAGCGGACTGAATCATTGTCACAGTCATGGTGTCCTCCATCGTGACATAAAAGGCTCAAATCTTCTCATTGACAATAATGGTGTCTTGAAAATTGCCGATTTTGGTTTGGCAAGTTATTTTGACCCCCATCACAGTGTTCCACTGACAAGCCGTGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGAGCAAATCATTATGGAGTTGCAGTGGATTTGTGGAGCACCGGTTGCATACTGGGTGAACTATATACTGGCAGACCCATATTACCAGGAAAAACGGAGGTTGAGCAGTTGCATCGGATTTTTAAACTTTGTGGTTCACCATCTGAGGATTATTGGCATAAATTGCGGTTGCCACATTCAAGTATATTCAAGCCTGCAAACCACTATAGGCGGTGTGTTGCGGAAACATTCAAGGAATATCCATCTCCTGCTGTGATTCTTATAGAGACCCTCCTTTCTGTAGATCCAGCACATCGAGGGACCGCAGCTGGTGCTCTGAAAAGTGAGTTCTTTACATCAGAACCCATGGCTTGTGATCCATCAACTTTACCAAAATATCCTCCCAGCAAAGAGATTGATGCCAAATTGCATGATGAAACCAGAAGGCAAGGAACCGTTGGAAGTAGAGAGCAAAAAGTTGGCTCAGTAGTTAGACAAGATAAAGGAACTAGGGCACATGTCACAGCAGCTGACCGAGGCATGTCAATACAGCGTGAGCAACGTTATTCCAGCTCCAACAACCTAAGTGAGTTATCCAAACATCATAGAGAACCTGTGTCTGGATTTCTGGTTTTCCCTCCTCACAAACAGTCAGAAGATGCTAAAGATATCGGAAATAATTTATCTGGGCGTCTCTATAAAAAGCCTTCACATTCAGGTCCATTGGTTCCTGGTTATAACTGGACAAGGAGTGGTAAGGAAGTTGATGAAGGCGCTCCTGTTTCAAACAGAGCGAACCTATCCAAACTATCTGGCCTAGTGGCATCTAGGACTACTTCATCTAAAGACCAGGAGGAAAAACCTGTTCAGTTGCACCACAGAAAACCAATTGAAGTAAAAAAATCCGTGGAATCAACTAGTGGATCAGAATCAAGAAGGCAGGATCGAAAGCGGATTGCCGATCTCACTCATATTGAAAGTGGAAGGGTTCCTAATGAAAAACTAAATTCGGATGGGCATGGGCCCAGGGGAAACAAGATATATATGTCAGGCCCATTACTGGCTCAATCAAACAACATGGATATGAAAGAGCATGACAGAAAGATCCAGGAGTTTTCAAGAAAAGCAAGAATTGACAAGTCTAGAGCAAGAGGTTACAAAGTCCGTTCACAGCCGAAGGAGGAGTAG 2097 0.4268 MGSICSKSSAVEDSNESITNKLSSSSKRSAELNSLRLNSSKRVEAVRVKDKVLNSQRSDVKVSLVNKKANGSVKLYEVQNGMNKIEKAGLTVIDHPSFGRIPKAVEGEQVAAGWPAWLSSVAGEAVKGWLPRSANTFERLHKIGQGTYSTVYKARDVTNQRIVALKRIRFDNLDPESVKFMAREIHVLRKLDHPNIIKLEGLITSSTSRSLYLVFEYMEHDLTGLASNPAIKFSEPQLKCYMQQLLSGLNHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASYFDPHHSVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWHKLRLPHSSIFKPANHYRRCVAETFKEYPSPAVILIETLLSVDPAHRGTAAGALKSEFFTSEPMACDPSTLPKYPPSKEIDAKLHDETRRQGTVGSREQKVGSVVRQDKGTRAHVTAADRGMSIQREQRYSSSNNLSELSKHHREPVSGFLVFPPHKQSEDAKDIGNNLSGRLYKKPSHSGPLVPGYNWTRSGKEVDEGAPVSNRANLSKLSGLVASRTTSSKDQEEKPVQLHHRKPIEVKKSVESTSGSESRRQDRKRIADLTHIESGRVPNEKLNSDGHGPRGNKIYMSGPLLAQSNNMDMKEHDRKIQEFSRKARIDKSRARGYKVRSQPKEE* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0489 698 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Lan7g0489 698 Pfam Protein kinase domain 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0489 698 SMART serkin_6 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0489 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Lan7g0489 698 SUPERFAMILY Protein kinase-like (PK-like) 131 427 IPR011009 -
Lan7g0489 698 MobiDBLite consensus disorder prediction 513 698 - -
Lan7g0489 698 PANTHER CYCLIN-DEPENDENT KINASE 1 682 - -
Lan7g0489 698 MobiDBLite consensus disorder prediction 448 478 - -
Lan7g0489 698 PANTHER CELL DIVISION PROTEIN KINASE 1 682 - -
Lan7g0489 698 ProSiteProfiles Protein kinase domain profile. 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0489 698 CDD STKc_CDK9_like 137 421 - -
Lan7g0489 698 MobiDBLite consensus disorder prediction 583 636 - -
Lan7g0489 698 MobiDBLite consensus disorder prediction 1 33 - -
Lan7g0489 698 Gene3D Phosphorylase Kinase; domain 1 124 219 - -
Lan7g0489 698 Gene3D Transferase(Phosphotransferase) domain 1 220 460 - -
Lan7g0489 698 MobiDBLite consensus disorder prediction 663 698 - -
Lan7g0489 698 MobiDBLite consensus disorder prediction 567 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0489 Lan-Chr7 3582594 3589319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0489 129 463 Core Cell Cycle Gene Families AT5G10270 49.288 2.46e-113 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan7g0489 Pkinase 9.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0489 - - gmx:100807590 1030.39