Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0472 ATGATGGATGATGCATATAACAAGAGTAGGAAATCTAACAAGAGTATTCATGAAAGTGAAAGCCAAGATTTTGAGATGGGTAAGGGAAAGGGAAAGGGTGTTAGTTTAAGCTCACAGAGGCCTCTTAAGAAGATTCGTAGTCCTGAACGTAACCAAAACCAATCCTCTCTTCAACAACCTCTTCCTTCTTCTTCAAGAATAGTATTCCCTTTTGCTCTTGAAGGCTCTCAAACTCAATCTCCAATGCAATTCTCACACCAATCTGGAACCTCAAACTTTTCTCCTTTTCCTCCACCACTTCTTCACCCAACCCAGCAATTCCAGCAACAGCAACAAATGATATCTTTTGGTTCACATTACAATATTGGGTATCCAATACAACACCAACAGGTTCAGTATCAGCATCAACTTCAGTATTGGAGTGATGCGCTGAATCTAAGTCCAAGAGGAAGACCAGTGTTAAGGCCTCAATTACAACATTTGAGTCCTACAAAGCTCTATAGAGGAGTGAGGCAACGCCATTGGGGCAAATGGGTTGCTGAAATTCGTCTACCTCGCAATAGAACTCGCCTCTGGCTAGGCACATTTAACACGGCTGAAGATGCCGCAATGGCTTATGATTGCGAGGCCTTTAAGCTCAGAGGAGAGAATGCTAGGCTCAATTTCCCTGAACTTTTTCTAAACAAGGTTAAGTCACCTTCAACAACTAAAACAGCTTCACCAGAAACTTCTGTTTCTCAGCCACATGATGGTTCAACTTCAAGACAACCTGAGCCAATTCAAGAAGAAACTATGAATGTGAACGCTGAGAGCGTTCTATCACTGGCACCAATATCAGAAGAGGTTACTGATAACAATTCAATAGTGAGTGAGGAAGTTCAAGTGGCTGGTGAAGGCATTTCAGAGTCTGAGGAATTGGTTTGGGGAGATATGGCTGCTTGGTTCAATGCAGGTTGGGATCCTCGTAGTCCTGTGTGGGATGATTTTGACACTAACAATAATCTTCTTTTGCAGTCACAGTTTCCTTTTGTGAATCCAAATCAGCAAGAATTCAACGATCCTGATGCTGATCAGAGGCAAGAATATAACACAGGAACTGGTTCTTCATCTTCCTCTTCTCCCATGATGCCCTTCTTCTGGAAGGGTCAAAATTGA 1155 0.4242 MMDDAYNKSRKSNKSIHESESQDFEMGKGKGKGVSLSSQRPLKKIRSPERNQNQSSLQQPLPSSSRIVFPFALEGSQTQSPMQFSHQSGTSNFSPFPPPLLHPTQQFQQQQQMISFGSHYNIGYPIQHQQVQYQHQLQYWSDALNLSPRGRPVLRPQLQHLSPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFNTAEDAAMAYDCEAFKLRGENARLNFPELFLNKVKSPSTTKTASPETSVSQPHDGSTSRQPEPIQEETMNVNAESVLSLAPISEEVTDNNSIVSEEVQVAGEGISESEELVWGDMAAWFNAGWDPRSPVWDDFDTNNNLLLQSQFPFVNPNQQEFNDPDADQRQEYNTGTGSSSSSSPMMPFFWKGQN* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0472 384 MobiDBLite consensus disorder prediction 1 62 - -
Lan7g0472 384 CDD AP2 165 225 IPR001471 GO:0003700|GO:0006355
Lan7g0472 384 MobiDBLite consensus disorder prediction 78 95 - -
Lan7g0472 384 Gene3D AP2/ERF domain 166 224 IPR036955 GO:0003700|GO:0006355
Lan7g0472 384 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 35 381 - -
Lan7g0472 384 MobiDBLite consensus disorder prediction 48 62 - -
Lan7g0472 384 Pfam AP2 domain 167 215 IPR001471 GO:0003700|GO:0006355
Lan7g0472 384 SMART rav1_2 166 229 IPR001471 GO:0003700|GO:0006355
Lan7g0472 384 SUPERFAMILY DNA-binding domain 166 224 IPR016177 GO:0003677
Lan7g0472 384 MobiDBLite consensus disorder prediction 1 27 - -
Lan7g0472 384 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 35 381 - -
Lan7g0472 384 MobiDBLite consensus disorder prediction 232 260 - -
Lan7g0472 384 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Lan7g0472 384 PRINTS Ethylene responsive element binding protein signature 189 205 IPR001471 GO:0003700|GO:0006355
Lan7g0472 384 MobiDBLite consensus disorder prediction 345 384 - -
Lan7g0472 384 MobiDBLite consensus disorder prediction 78 97 - -
Lan7g0472 384 ProSiteProfiles AP2/ERF domain profile. 166 223 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0472 Lan-Chr7 3461110 3462914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0472 20 330 AP2-EREBP Transcription Factor Family AT4G28140 40.867 1.25e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan7g0472 AP2 2.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0472 - - lang:109352524 704.131