Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0466 ATGGTTTTGATGTTTCTGGCCAAAAAGATTTTCTTCTTCTCCGTAAAAAAGAAGAAAGAAATTGGGGTTCTTTTAAATTTAAGAGAGATAAATTCTTCAATGCTCTTACAAGGATCTCGAATTCAAAATATACATGGGGTGTTGCAGCTTGAGGAAATGGGGTGTTGTGTCTCAACAAGCAGCAGGAGTACTTGTAGCAGCAGGAGCAATGGAGAAAAGGTCTCTCCATCTTGCTTAGAAGTTGGTTGCTGTGGGCAAAAGAGAGCAGCGAGGAGAACCTTCTCTGATCATGTTATTTCTCTACACCATTTACCATCCATACCCGGCAGAATGTTCACCAATGGAAAGAACCAGTCTTCCTGCATGTTTACGCAGCAGGGCCGCAAGGGTATTAACCAGGATGCTATGGTTGTATGGGAAGATTTCGTGTCTGAAGATATGATCTTTTGTGGTATATTTGATGGCCATGGTCCACATGGTCATCTTGTTGCACAAAAAGTGAGGGATACCTTGCCATTAAAATTGCTATCATTTTTGCATTCGTCTGAATTGAAATCAAATGGAAATGGATTAGGTAAAGCATGCTTCAAAGAGAACATAGAACCTGATACCAGAGAATCTGATAAGGATTGCTCTGCCAAGGATAAACTGAGTTCTACATGGAGAGAAGCTTTCATGAAGTCATACAAGGATATGGACAAAGAGCTCAGGTCTCATCCTCATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTAACTTTAGTGAAGCAGGGTTCAAATCTGTTCCTGGGCAATATCGGGGATTCACGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAGTTGATTTGAAGCCTGATTTGCCAAGTGAAGCAGAAAGAATTAAACACTGCAAGGGTAGAGTATTTGCTTTGCAAGATGAGCCAGAAGTTCACAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGACTATGGTGTGATTTCTATACCTGAATTTTCTCACCAGCTGCTTACTAATAGAGATCAATTCATTGTTCTAGCCTCAGACGGGGTGTGGGATGTTTTAAGCAACGAAGAGGTGGTTGAGATAGTATCTTCAGCACCAACGCGGTCATCAGCAGCGAGGATTGTGGTAGATTCTGCTGCTCGGGAGTGGAAACTCAAATATCCTACTTCAAAGATAGATGACTGTGCTGTTGTGTGCCTATTCTTGGATGGGAAAATGGACTCAGAATCTGAATATGATGAACAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCAGGAGTTAATCCAATTGAGTCAGATGAGGGACAAAAATCCGAGCCATCTTTGCATCGGAACGGCACTGTGAGATCCTCAGAAGAGAATGAGACTAATGGAGCACTATATGTTGAAGTTGAAATTGGAGCATCATCCGTTGATGATCAAAACTGGCTAGGTTTGGAAGGGGTCACCCGTGTGAACTCACTAGTTCAACTTCCTAGATTTTCTGAGGAAAGGTCAAACTCTTGA 1581 0.4263 MVLMFLAKKIFFFSVKKKKEIGVLLNLREINSSMLLQGSRIQNIHGVLQLEEMGCCVSTSSRSTCSSRSNGEKVSPSCLEVGCCGQKRAARRTFSDHVISLHHLPSIPGRMFTNGKNQSSCMFTQQGRKGINQDAMVVWEDFVSEDMIFCGIFDGHGPHGHLVAQKVRDTLPLKLLSFLHSSELKSNGNGLGKACFKENIEPDTRESDKDCSAKDKLSSTWREAFMKSYKDMDKELRSHPHLDCFCSGSTAVTLVKQGSNLFLGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPSEAERIKHCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSHQLLTNRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARIVVDSAAREWKLKYPTSKIDDCAVVCLFLDGKMDSESEYDEQGFSSATIQSNHSGVNPIESDEGQKSEPSLHRNGTVRSSEENETNGALYVEVEIGASSVDDQNWLGLEGVTRVNSLVQLPRFSEERSNS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0466 526 ProSiteProfiles PPM-type phosphatase domain profile. 119 425 IPR001932 -
Lan7g0466 526 MobiDBLite consensus disorder prediction 461 475 - -
Lan7g0466 526 CDD PP2Cc 118 425 IPR001932 -
Lan7g0466 526 SUPERFAMILY PP2C-like 112 427 IPR036457 -
Lan7g0466 526 PANTHER ALPHABET, ISOFORM E-RELATED 53 514 - -
Lan7g0466 526 MobiDBLite consensus disorder prediction 435 481 - -
Lan7g0466 526 MobiDBLite consensus disorder prediction 436 460 - -
Lan7g0466 526 Pfam Protein phosphatase 2C 200 394 IPR001932 -
Lan7g0466 526 Gene3D - 110 427 IPR036457 -
Lan7g0466 526 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 53 514 - -
Lan7g0466 526 SMART PP2C_4 111 423 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0466 Lan-Chr7 3406773 3410885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0466 53 522 PP2C-type Phosphatase Gene Family AT1G03590 67.296 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0466 - - lang:109351819 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0466 7 3406773 3410885 Lan8g1499 8 22028632 22030891 LSH
Lan7g0466 7 3406773 3410885 Lan13g0483 13 3561432 3565321 LSH