Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0451 ATGGTGAGAACTCCTTCTTGTGACAAAAGTGGAATGAGGAAAGGTACTTGGACCACTGAAGAAGACAAGAAGTTAATTGCTTATGTTACTAGATATGGCTGCTGGAATTGGCGCCAACTCCCCAAGTTTGCTGGTCTGCAAAGGTGTGGGAAGAGTTGTAGATTGAGGTGGTTGAATTATCTGAGGCCTAATATCAAAAGAGGGAATTTCACTAAAGAAGAAGAAGAGATTATTATCAGATTGCACAATAAGCTGGGCAATAGATGGTCTATCATTGCCACTCATTTATTAGGAAGAACAGACAATGAAATAAAGAATTATTGGCATACCTCACTAAAGAAGATCTCTCAACAAACCAAAGTTACAAATGAAAATTCCAAAGCCTCATCCAAACCAAAAGATAATGAATCCAACCTTGGAAGTTACTCATTGCCTAACAATGTTTCTCTTCAAGTTACTCCTCCAACTACTACTTCCCAAATCTCTGATAGTATTACGAGCTCATTATCCCCACTATCATCTTCAAGTGAATTTTCCTCCATATCTTGGGGTGATACTAATTGTACCACAAAGTTGGTGATTGAAGATGACTTCCCTTTTCTTGATGATGCATTTTGGACAAAATCAGATATTGTTGATATTTCCTACACTCCTCCAAGTGAAATAGTTCAAGGAGATAGCAATGATGCTTTTGAGAGTCTATATACTACTCAGAACCTTGCTGCACTGTCACCCCAATATCAATCCTCCAGTGAAAGTATGGTTTTGGAGAGTGGCAGTTTTCTTGATGCAGATACTGAAGTAAAAATGGATAATTTTTGGACACAACCATTTGTGTCTGATACGTGCCAGGTTCCTAACCAACTACTCACACCCTTTGAGACTCAATCTCAATACTTTTCTTCTGTTCATGGGGCAGACTTTTGGAATCAGGATGATAATGATTGTTACTTATATGACGGTGTGATGGATCTAGTATAA 981 0.3823 MVRTPSCDKSGMRKGTWTTEEDKKLIAYVTRYGCWNWRQLPKFAGLQRCGKSCRLRWLNYLRPNIKRGNFTKEEEEIIIRLHNKLGNRWSIIATHLLGRTDNEIKNYWHTSLKKISQQTKVTNENSKASSKPKDNESNLGSYSLPNNVSLQVTPPTTTSQISDSITSSLSPLSSSSEFSSISWGDTNCTTKLVIEDDFPFLDDAFWTKSDIVDISYTPPSEIVQGDSNDAFESLYTTQNLAALSPQYQSSSESMVLESGSFLDADTEVKMDNFWTQPFVSDTCQVPNQLLTPFETQSQYFSSVHGADFWNQDDNDCYLYDGVMDLV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0451 326 CDD SANT 69 112 IPR001005 -
Lan7g0451 326 MobiDBLite consensus disorder prediction 118 167 - -
Lan7g0451 326 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan7g0451 326 SMART sant 66 114 IPR001005 -
Lan7g0451 326 SMART sant 13 63 IPR001005 -
Lan7g0451 326 CDD SANT 16 61 IPR001005 -
Lan7g0451 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan7g0451 326 Gene3D - 14 66 - -
Lan7g0451 326 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lan7g0451 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan7g0451 326 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 275 - -
Lan7g0451 326 Gene3D - 68 139 - -
Lan7g0451 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 275 - -
Lan7g0451 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan7g0451 326 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lan7g0451 326 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0451 Lan-Chr7 3295938 3297403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0451 1 221 MYB Transcription Factor Family AT2G31180 46.606 2.15e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g0451 Myb_DNA-binding 6.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0451 K09422 - gmx:778184 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0451 7 3295938 3297403 Lan8g1516 8 22203631 22205257 LSH