Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0450 ATGGTGAGAACTCCTTACAGTGACAAAAATGGAATAAAGAAAGGAACATGGACACCAGAGGAAGACAGAAAGCTGCTTGCATATGTTACTAAGTATGGTCACTGGAATTGGCGCCAACTTCCCAAGTTTGCCGATCTTGCAAGGTGTGGAAAGAGTTGCAGATTGAGGTGGAAGAATTATTTAAAGCCTGGGATCAAAAGAGGGAACTACACCCAAGAAGAAGAAGAGACTATAGTTAAACTACACGCAAAGTTTGGCAACAGATGGTCTAAGATTGCCTCTCACTTACCTGGAAGATCAGACAACGGGATTAAAAATCACTGGCACGCTTGTCTCAAGAAGCACTTTCAACACAATTCAGTGAGAAATGAAAAAGCAGTTGAACCAACGCAAGAGAAGGATGTGTCGTTAGAAATCAATGACCCTTTTCACAACAATTCTCCATCTACTCCACAAACCCGTGATGCTTCTCCATCGTCCCAGCAGACATCAGTTAGTGACATTTTGTGCTCAACAGCGGAATCTGCTTCAGACGGTAATTACTTGAATATGGTTCAAGATGTGGATCAAGTTGCTAATTTTCTTGACATAGACATGGGGCTTTTAAGTGGTGATTTTTACACTACTGAATTTGATGTGGCTGACTTTTCCTACATCCCAGGCGAATTATATGCACGTTTTGTGAGTGAACCCGAATGTTTGAGTCCAGTCTATGATGCACAACTTTGGGGCCTGTAA 738 0.4201 MVRTPYSDKNGIKKGTWTPEEDRKLLAYVTKYGHWNWRQLPKFADLARCGKSCRLRWKNYLKPGIKRGNYTQEEEETIVKLHAKFGNRWSKIASHLPGRSDNGIKNHWHACLKKHFQHNSVRNEKAVEPTQEKDVSLEINDPFHNNSPSTPQTRDASPSSQQTSVSDILCSTAESASDGNYLNMVQDVDQVANFLDIDMGLLSGDFYTTEFDVADFSYIPGELYARFVSEPECLSPVYDAQLWGL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0450 245 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lan7g0450 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lan7g0450 245 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 168 - -
Lan7g0450 245 CDD SANT 16 61 IPR001005 -
Lan7g0450 245 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan7g0450 245 Gene3D - 7 67 - -
Lan7g0450 245 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan7g0450 245 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Lan7g0450 245 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 168 - -
Lan7g0450 245 MobiDBLite consensus disorder prediction 139 165 - -
Lan7g0450 245 SMART sant 13 63 IPR001005 -
Lan7g0450 245 SMART sant 66 114 IPR001005 -
Lan7g0450 245 MobiDBLite consensus disorder prediction 140 165 - -
Lan7g0450 245 Gene3D - 68 138 - -
Lan7g0450 245 CDD SANT 69 109 IPR001005 -
Lan7g0450 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lan7g0450 245 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0450 Lan-Chr7 3287617 3289246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0450 1 114 MYB Transcription Factor Family AT1G34670 64.035 6.15e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g0450 Myb_DNA-binding 3.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0450 K09422 - gmx:106799185 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0450 7 3287617 3289246 Lan8g1517 8 22208418 22210117 LSH