LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan7g0446	ATGAATAAGATATGCGAGCTGTGCAAAGTTCCGGCAAGGATCTTCTGCGAGTCAGACCAAGCAACCTTATGCTGGGACTGCGATGCTCAGGTACACGCCGCCAACTTCTTAGTCGCAAGACACTCCAGAACCCTTCTCTGCCACACCTGCCACTCTCTCACGCCGTGGAAAGCCTCCGGCGCCAGACTCGGAAACACCGTCTCCTTCTGCCACAATTGCTCCGACGAAGAACAAATTCCAGATACCGGAGGAAGGAATGACGGTGGAATGGGTGGTTCCAATTATACTCAGCCGGTCCCTTCGTCCTCGACGCAACCGCCGGCGCCGGCGAGTTCTGAGGAATCCGTTATCATGTGTACTAATAACAGCAACGGTGAAGGTGTTTCTGAAACGGTAACTAGAACAACCTCGTTGAAACGACAGCATAAGGATTCGTGA	438	0.5274	MNKICELCKVPARIFCESDQATLCWDCDAQVHAANFLVARHSRTLLCHTCHSLTPWKASGARLGNTVSFCHNCSDEEQIPDTGGRNDGGMGGSNYTQPVPSSSTQPPAPASSEESVIMCTNNSNGEGVSETVTRTTSLKRQHKDS*	146

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan7g0446	145	PANTHER	-	3	144	-	-
	Lan7g0446	145	MobiDBLite	consensus disorder prediction	89	135	-	-
	Lan7g0446	145	CDD	Bbox1_BBX-like	4	46	-	-
	Lan7g0446	145	MobiDBLite	consensus disorder prediction	80	145	-	-
	Lan7g0446	145	Pfam	B-box zinc finger	2	43	IPR000315	GO:0008270
	Lan7g0446	145	SMART	bboxneu5	1	46	IPR000315	GO:0008270
	Lan7g0446	145	ProSiteProfiles	Zinc finger B-box type profile.	1	46	IPR000315	GO:0008270
	Lan7g0446	145	PANTHER	ZINC FINGER PROTEIN CONSTANS-LIKE 10	3	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan7g0446	Lan-Chr7	3250917	3251583	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan7g0446	1	73	C2C2-CO-like Transcription Factor Family	AT4G27310	65.753	3.91e-32	112

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Lan7g0446		zf-B_box	4.6e-05	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan7g0446	-		-	vun:114168631	148.673

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan7g0446	7	3250917	3251583	Lan13g0494	13	3649515	3650337	LSH