Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0433 ATGGGAAGCAAGAATTACTCCTTGGTTTTGATTCTTGGTCTTCTAGCATTAATTGGACCAACTCATGCTCAACTAAAACTTGGGTTCTATGCTAGAAGCTGCCCAAAGGCTGAGAAGATCATTTTGAAGTATATTCATGACCATATCCCCACTACTCCATCTTTGGCAGCTGCACTATTAAGACTGCACTTCCATGACTGTTTTATCAGGGGCTGTGATGCATCAGTGCTTGTGAACTCAACAAAAACTAATGCAGCTGAAAAGAGTGCTGTTCCAAATTTTACACTCAGAGGTTTCGAATTCATTGACATCTTAAAGAGCCTTGTTGAAGCCGAATGCCCTGGGGTAGTATCTTGTGCTGATATTGTAGCTTTGACTGCTAGAGACTCTGTACAAGCCATAGGGGGACCCTTTTGGAATGTTCCAACAGGTCGAAGGGACGGAGTAATCTCAAATGCAACAGAAGCCTTATTTGGCCTACCTGCTCCATTTCACAACCTTACCACCCTCCTAACAACGTTTGCCAATGTTGGACTAGATACCAATGATCTTGTTGTGCTCTCTGGCGGTCACACAATTGGTCTTTCACATTGCTCAACAATCTCAACACGTCTGTTTAATTTTACTGGTAACGGTGGTCAAGACCCTGCTCTAGATAGAGTATATGCGACAAATCTTAAGAGCCATAGGTGCAAGAGCATCAATGATAATACCACACTCATTGAAATGGACCCTGGAAGTCGCAATAATTTTGATGTTGGCTACTACAAGCAACTTGTTAAGAGAAGGGGTTTGTTCACATCAGATGATTCATTGTTGGATAGTTCTGTTACAAGGTCTATTATCAACCAACAACTTCAGTCACCTCAAAAATTCTTCATTGAGTTTGGCAAATCCATGGAGAAAATGGGCCGAATTAATGTCTTGACTGGGAGACAAGGACAAATTAGGAAGCATTGTGCAATTATAAATAGCTAA 978 0.4141 MGSKNYSLVLILGLLALIGPTHAQLKLGFYARSCPKAEKIILKYIHDHIPTTPSLAAALLRLHFHDCFIRGCDASVLVNSTKTNAAEKSAVPNFTLRGFEFIDILKSLVEAECPGVVSCADIVALTARDSVQAIGGPFWNVPTGRRDGVISNATEALFGLPAPFHNLTTLLTTFANVGLDTNDLVVLSGGHTIGLSHCSTISTRLFNFTGNGGQDPALDRVYATNLKSHRCKSINDNTTLIEMDPGSRNNFDVGYYKQLVKRRGLFTSDDSLLDSSVTRSIINQQLQSPQKFFIEFGKSMEKMGRINVLTGRQGQIRKHCAIINS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0433 325 PANTHER PEROXIDASE 25-RELATED 5 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 Gene3D Peroxidase, domain 2 161 303 - -
Lan7g0433 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Lan7g0433 325 Pfam Peroxidase 47 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 Gene3D - 28 324 - -
Lan7g0433 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PANTHER PEROXIDASE 5 324 - -
Lan7g0433 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Lan7g0433 325 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
Lan7g0433 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan7g0433 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0433 Lan-Chr7 3095300 3097564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0433 14 325 Peroxidase AT1G05260 61.022 3.23e-145 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1898 6 30025774 30028357 Lan7g0433 7 3095300 3097564 PCT
Lan10g0041 10 235965 237654 Lan7g0433 7 3095300 3097564 PCT
Lan7g0433 7 3095300 3097564 Lan6g1898 6 30025774 30028357 PCT
Lan7g0433 7 3095300 3097564 Lan10g0041 10 235965 237654 PCT