Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0426 ATGTTTCAACCAAACCATCAGTTTCTTAACGCACTTGACAACATGGCTCAGAACATTTCTGAGAGCGATATACCTCGGATCGATGAGTTCGACAGTGCTAACAGGTCTGGCAGTGAAAACCAGGAAGGTGCCTCTGGTGAAGACCAAGAGCCCAGTGCAAAGAAAAAGCGCTACCATCGTCACACTCAGCATCAGATCCAGGAAATGGAAGCGTTCTTCAAGGAGTGCCCACACCCTGATGACAAGCAAAGAAAGGAACTGAGCAGGGAGCTAGGGTTAGAGCCATTGCAGGTTAAGTTTTGGTTTCAGAACAAGCGCACTCAGATGAAGACCCAACATGAGCGCCATGAGAACACACAGCTTAGAACCGAAAATGACAAGCTTCGAGCTGAAAACATGACGTATAGGGAAGCTCTTAGCAATGCCTCGTGTTCTAATTGTGGTGGACCAACTGCTCCAGGCGAAATGTCATTTGATGAACATCACTTGAGACTTGAAAATGCTAGGCTAAGAGAAGAGATTGATCGCATTTCTGCAATTGCTGCCAAGTACGTGGGAAAGTCAGTGGTGAATTATTCAAACCTTTCCCCTTCTCTTCCTCCACGCCCACTAGAACTTGCAGCTGGTGGCGGTTTTGGTGGCCAGCCAGCTGGGATTGGTGGTGGTGATATGTATGGTGTTGGTGGAGATTTTCTAAGGTCAATTAGTGGGCCCACTGAATCTGACAAGCCAATAATAATTGAGCTTGCTGTTGCAGCTATGGAGGAGCTTATTGGGATGGCACAAATGGGTGAGCCTCTTTGGTTGACCACCCACACACATGATGGAACTTCTGTTGTGTTAAATGAAGATGAATACATTAGGTCCTTTCCTAGGGGAATTGGCCCAAAACCTACTGGCTTCAAATGTGAAGCTTCTCGAGAAACTACTGTTGTTATCATGAATCATGTCAACCTTGTTGAGATTCTCATGGATGTGAATCAATGGTCAACAGTGTTCTCTGGTATTGTCTCAAGAGCAATGACTCTGGAAGTGCTATCAACTGGGGTTGCAGGGAACTATAATGGTGCCTTACAAGTGATGACAGCAGAGGTACAAGTACCTTCACCTCTTGTGCCAACTCGTGAGAGTTATTTTGTAAGATATTGTAAGCAACATGTAGATGGGACTTGGGCAGTAGTGGATGTGTCTTTGGATAATTTGCGTCCTAGTCCTTCACCTAGATGTAGAAGAAGGCCTTCTGGCTGCTTAATTCAAGAATTGCCCAATGGATACTCAAAGGTCACATGGGTGGAGCATGTGGAAGTTGATGATAGAGGTGTTCATGATCTTTACAAGCAGCTTGTTAGCACTGGAAATGCATTTGGTGCAAAACGTTGGGTTGCAACCTTAGATCGTCAATGTGAAAGGCTTGCTAGTGCCATGGCAACAAACATACCCACAATAGAAGTTGGCGTGATAACAAACCAAGAAGGGAGGAAGAGTATGCTGAAACTTGCTGAGAGAATGGTTATAAGCTTTTGTGCTGGAGTGAGTGCTTCTACCACTCACACATGGACCACACTGCAGACAGGAACAGGGGCTGATGATGTAAGGGTAATGACCCGAAAGAGTGTTGATGACCCAGGAAGACCCCCTGGTATTGTTCTTAGTGCTGCAACTTCTTTTTGGCTTCCTGTTCCAATGAAAAGAGTTTTTGACTTCCTCCGTGATGAGAATTCTAGAAGTGAGTGGGATATTCTTTCAAATGGAGGAGCTGTCCAAGAAATGGCTCACATTGCAAATGGACGAGAAACTGGAAATTGTGTGTCTCTTCTTAGAGTGAACAGTGCCAATTCAAGCCAAAGTAACATGTTGATATTACAAGAAAGTTGCACCGATTCAACAGGCTCTTTTGTTATCTATGCTCCAGTTGATATTGTTGCAATGAATGTTGTTCTAAGTGGTGGAGACCCAGACTATGTAGCCCTTCTTCCTTCAGGATTTGCAATCTTACCAGATGGGACAACAACACATGGAAATGGCATTGGTGAAACTGTACCTAGTGGATCACTCTTGACTGTGGCATTTCAAATATTGGTTGATTCAGTACCAACAGCTAGGCTTTCTCTTGGTTCTGTTGCTACTGTTAATAATCTTATTGCTTGCACCGTTGAGAGAATCAAAGCTTCTTTATCCCCAGACCTTCAAGATTAA 2196 0.4435 MFQPNHQFLNALDNMAQNISESDIPRIDEFDSANRSGSENQEGASGEDQEPSAKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENDKLRAENMTYREALSNASCSNCGGPTAPGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKSVVNYSNLSPSLPPRPLELAAGGGFGGQPAGIGGGDMYGVGGDFLRSISGPTESDKPIIIELAVAAMEELIGMAQMGEPLWLTTHTHDGTSVVLNEDEYIRSFPRGIGPKPTGFKCEASRETTVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEVQVPSPLVPTRESYFVRYCKQHVDGTWAVVDVSLDNLRPSPSPRCRRRPSGCLIQELPNGYSKVTWVEHVEVDDRGVHDLYKQLVSTGNAFGAKRWVATLDRQCERLASAMATNIPTIEVGVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLQTGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPMKRVFDFLRDENSRSEWDILSNGGAVQEMAHIANGRETGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGTTTHGNGIGETVPSGSLLTVAFQILVDSVPTARLSLGSVATVNNLIACTVERIKASLSPDLQD* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0426 731 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 19 727 - -
Lan7g0426 731 SUPERFAMILY Bet v1-like 240 472 - -
Lan7g0426 731 Gene3D - 40 129 - -
Lan7g0426 731 ProSiteProfiles START domain profile. 239 473 IPR002913 GO:0008289
Lan7g0426 731 SMART HOX_1 53 116 IPR001356 GO:0003677
Lan7g0426 731 CDD START_ArGLABRA2_like 243 469 - -
Lan7g0426 731 CDD homeodomain 55 113 IPR001356 GO:0003677
Lan7g0426 731 SMART START_1 248 470 IPR002913 GO:0008289
Lan7g0426 731 Coils Coil 111 138 - -
Lan7g0426 731 SUPERFAMILY Bet v1-like 489 722 - -
Lan7g0426 731 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Lan7g0426 731 MobiDBLite consensus disorder prediction 29 64 - -
Lan7g0426 731 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
Lan7g0426 731 Gene3D - 248 463 IPR023393 -
Lan7g0426 731 Pfam START domain 249 470 IPR002913 GO:0008289
Lan7g0426 731 SUPERFAMILY Homeodomain-like 48 116 IPR009057 -
Lan7g0426 731 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 727 IPR042160 -
Lan7g0426 731 Pfam Homeodomain 55 110 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0426 Lan-Chr7 3005395 3031720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0426 1 726 Homeobox Transcription Factor Family AT1G05230 76.630 0.0 1131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan7g0426 START 6.3e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0426 K09338 - gmx:100782260 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0426 7 3005395 3031720 Lan8g1535 8 22433763 22440151 LSH
Lan7g0426 7 3005395 3031720 Lan13g0503 13 3732757 3739585 LSH
Lan6g1885 6 29916912 29924173 Lan7g0426 7 3005395 3031720 PCT
Lan7g0426 7 3005395 3031720 Lan6g1885 6 29916912 29924173 PCT