Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0417 ATGAAGTGGAGTAGAGGTCACATCATAGGTCATGGCTCATCAGCCACCGTCTCCGTCGCCACCGGCTGCAGCGGCATCTTTGCCGTCAAATCAACAAAACTATCTACTTCGGAGTCTTTGCAAAGAGAACAAATAATTTTATCTACTCTATGCTCACCTTTTATAGTTGCCTATAAAGGGTGTGACATTAAGATGGAGAACAACATGCCCGTGTACAATCTCTTCTTGGAGTACATGCCATTTGGCACGCTTGTTCAGGCAACTCACCGGCACGGTGGGAGGCTCAATGAGTCGGCGATCGCTTGCTACACAAGGCATGTTCTACAAGGGATAGAGTATTTGCATTCAAAAGGGTTGGTGCATTGTGACATCAAGGGTGCTAATATTTTGATTAGTGAAGATGGGGTGGCCAAAGTTTGTGACTTTGGATGTGCTAAGGTTGTCATTGATGCTAAGGCCGCGGCACCAATCAGCGGCACACCGATGTTTATGGCGCCCGAGGTGGCGCGTGGCGAAGAACAAGGGTGCCCTAGTGATATTTGGTCAATTGGGTGCACTATGATTGAAATGGCCATTGGTGGTTCACCATGGCCTAATGTGGCAGACCCTTTTTCAATTCTTTACCATATTGCATATTCCAATAAGGTACCTGAGATTCCAAGTTTTCTATCTGAGGAAGCAAAGGATTTCTTGGAGAAATGTCTTAGGAGGAATCCACAAGAGAGGTGGACAGCTAATCAACTTTTGAAGCATCCATTTCTAGAGGAATTCAGTTTCAACTCTAAACAAATTGAGGAACTTAATTCAAGTTCTCCAACAAGTATTCTTGAGCAAGGCTTTTGGAATTATGTGGAGGAATCAGAAAGTCATGGAAATTTGATTCACATGACATGTTTTGAGAATTCCCCTGCTGATAGGGTCAGAAGTTTAGCTTTGTGTTCAGGGGAGCCCTGTTTGACATGGCATGATGATGAGAGTTGGATCACAACTAGAAGAAATTAG 1002 0.4421 MKWSRGHIIGHGSSATVSVATGCSGIFAVKSTKLSTSESLQREQIILSTLCSPFIVAYKGCDIKMENNMPVYNLFLEYMPFGTLVQATHRHGGRLNESAIACYTRHVLQGIEYLHSKGLVHCDIKGANILISEDGVAKVCDFGCAKVVIDAKAAAPISGTPMFMAPEVARGEEQGCPSDIWSIGCTMIEMAIGGSPWPNVADPFSILYHIAYSNKVPEIPSFLSEEAKDFLEKCLRRNPQERWTANQLLKHPFLEEFSFNSKQIEELNSSSPTSILEQGFWNYVEESESHGNLIHMTCFENSPADRVRSLALCSGEPCLTWHDDESWITTRRN* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0417 333 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 333 - -
Lan7g0417 333 Gene3D Transferase(Phosphotransferase) domain 1 2 308 - -
Lan7g0417 333 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lan7g0417 333 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Lan7g0417 333 SMART serkin_6 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0417 333 Pfam Protein kinase domain 5 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0417 333 ProSiteProfiles Protein kinase domain profile. 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0417 333 SUPERFAMILY Protein kinase-like (PK-like) 3 283 IPR011009 -
Lan7g0417 333 CDD STKc_MAPKKK 2 254 - -
Lan7g0417 333 PANTHER MAP KINASE KINASE KINASE 1 333 - -
Lan7g0417 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0417 Lan-Chr7 2931947 2933125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0417 1 284 MAP Kinase Kinase Kinase AT2G32510 53.608 2.04e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan7g0417 Pkinase 3.5e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0417 K20716 - gmx:100819665 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0417 7 2931947 2933125 Lan8g1556 8 22590667 22591995 LSH
Lan10g0027 10 140051 141552 Lan7g0417 7 2931947 2933125 PCT
Lan7g0417 7 2931947 2933125 Lan10g0027 10 140051 141552 PCT