Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0416 ATGGCCAGAGGGAGTGGACTCTCCATGGATTCAGATCCACTTGGGACCTTCTTTCTCCACAAACTCCCAACTGTTCTCAACTCTTTCCCTTCTCATGACCAAACCATTTGGACACTTAGTCCTAACAACACTAACATGGAGACTACCCTTATCACCTCTTCACCCTCACGCGCCACCACCACCGCCGCCGCCATACCCTTCCATGTCAACAACCATATCTCTCCATCTCATGACAGGATCATAGCAACAGAGATGGACTTCTTCTCTGACAAGAACAATAACATCAATGATGATAACGTTGCCTCTGTCCCTGACCATAATCACATGCATGATCATTCAAGTACCCCAGCTATGTTGGAATTCGAAGTAAACACTGGTCTGAATCTTCTTACAACCAACACTAGCAGTGCTCAATCGATGGTTGATAATGACGCATCGCCAAATTCAGAAGACAACAAAAGAACTAAGAATGAGAAGGATGTTCTTAAAGCTGAGCTAGAGCGAATGAAGGTTGAGAATCAACGGTTAAAGCAGACTTTTGATGAGGTTAATACTAATTACAAAGCCCTACAGATGCATTTGGTGAATTTGATGAAGGACCAGAATGGTGAGGATGGTGGTGGGAAAGTAGAAGAGAGAATGAAAAGGAAGCAAATTGAAAATAATGAGGTATTGGTTCCAAGGCAGTTTATGGATCTTGGTTTGGCTACAAATATTGCTGAGACTGAAAATGAAGAACCATCTTCTTCATCAAAGGGAAAAGGTCAAGATAGATCAGGATCACCAGGGAATAATAACATAGAGGTAGCTTCTAAGGAGTTAGTCACTACTAGTAAGAATGGAAATGGGAGTGGTAGTGATGAAGGACTTGTGTTTGATCAAGAGAAAAAGGATATTAGTAATGGTCGAGGGATTGAAAGTCCTCCAAAAAATGTTGATCAATCAGCTGAGGCTACCATGAAGAAGGCAAGAGTTTCTGTTAGAGCTAGATCAGAGGCACCCATGATCACTGATGGGTGTCAATGGCGAAAGTATGGGCAGAAGATGGCTAAAGGAAATCCATGTCCTCGAGCTTATTACCGGTGCACCATGGCTTCAGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGACAGGACAGTCCTTATCACAACATATGAAGGCAATCACAATCACCCTTTACCTCCAGCAGCTATGGCAATGGCACAAACCACTTCCTCAGCTGCAAGAATGCTGCTTTCAGGTTCAATGTCAAGCACAGATGGCCTAATGAATGCAAACTTTCACAATAGGACACTCCTTCCTTGCTCTTCAAGCATGGCATCTATCTCAGCAACTGCTCCATTTCCAACTGTTACACTGGACCTAACTAACTCTACAAGCCCTCTTCAGTTCCCAAGGCCTTTAAGCCAGTTCCAAATACCCTTCCCAGCTCAGAATTTTGTCAACTCCTCAGCCTCATTAATGCCTCAGATACTTGGTCAAGCATTATATAACCAATCTAAGTTTTCTGGTCTTCAAATGTCTCAAGATGGATTGGTAAACCCTTCTCAATTGAGGGATCATCAGGCACCACCACCACACCTTGCTGATACAGTTAGTGCTGCCACTGCAGCCATTGCAGCTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATCACTTCCATTGTTGGTGGTGGTTCTCAGCTAAACAACAATAGCACCAACAATAACTGCAGCAACAGCAATGGCAATATCACAACTACCAACAACAATGGAAAGCAATGA 1776 0.4358 MARGSGLSMDSDPLGTFFLHKLPTVLNSFPSHDQTIWTLSPNNTNMETTLITSSPSRATTTAAAIPFHVNNHISPSHDRIIATEMDFFSDKNNNINDDNVASVPDHNHMHDHSSTPAMLEFEVNTGLNLLTTNTSSAQSMVDNDASPNSEDNKRTKNEKDVLKAELERMKVENQRLKQTFDEVNTNYKALQMHLVNLMKDQNGEDGGGKVEERMKRKQIENNEVLVPRQFMDLGLATNIAETENEEPSSSSKGKGQDRSGSPGNNNIEVASKELVTTSKNGNGSGSDEGLVFDQEKKDISNGRGIESPPKNVDQSAEATMKKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTVLITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSTDGLMNANFHNRTLLPCSSSMASISATAPFPTVTLDLTNSTSPLQFPRPLSQFQIPFPAQNFVNSSASLMPQILGQALYNQSKFSGLQMSQDGLVNPSQLRDHQAPPPHLADTVSAATAAIAADPNFTAALAAAITSIVGGGSQLNNNSTNNNCSNSNGNITTTNNNGKQ* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0416 591 Gene3D WRKY domain 321 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan7g0416 591 SUPERFAMILY WRKY DNA-binding domain 329 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan7g0416 591 Coils Coil 152 186 - -
Lan7g0416 591 MobiDBLite consensus disorder prediction 511 530 - -
Lan7g0416 591 SMART WRKY_cls 336 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan7g0416 591 ProSiteProfiles WRKY domain profile. 331 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan7g0416 591 PANTHER OS05G0567200 PROTEIN 64 587 - -
Lan7g0416 591 MobiDBLite consensus disorder prediction 570 591 - -
Lan7g0416 591 MobiDBLite consensus disorder prediction 135 157 - -
Lan7g0416 591 Pfam WRKY DNA -binding domain 338 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan7g0416 591 MobiDBLite consensus disorder prediction 241 266 - -
Lan7g0416 591 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 64 587 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0416 Lan-Chr7 2925653 2928414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0416 73 574 WRKY Transcription Factor Family AT1G62300 47.801 1.63e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan7g0416 WRKY 4.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0416 - - gmx:100127384 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0416 7 2925653 2928414 Lan13g0516 13 3889206 3892347 LSH
Lan6g1873 6 29823675 29826866 Lan7g0416 7 2925653 2928414 PCT
Lan10g0026 10 132199 134779 Lan7g0416 7 2925653 2928414 PCT
Lan7g0416 7 2925653 2928414 Lan6g1873 6 29823675 29826866 PCT
Lan7g0416 7 2925653 2928414 Lan10g0026 10 132199 134779 PCT