Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0409 ATGGATTTTTCAATCTTCATGGAGGACCCGGGGATGGTAGAGAAGAAGGAGATCGAGGCACATTTGACTTCAGCCGCTGCTTTTGTGGAAGGTGGAGTCCAGGATTCTTGTGACGACGCTTGCAGCATATGTCTTGAAGGCTTCTCAATTACTGATCCTTTCTCGGTGACGAATTGCAAACACGCATTTCATCTTCAGTGCATTCTAGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAGGCCATCAGTCTCAAAGATCCAACCAGCCAGGAATTACTCGAGGCAGTGGAGAGAGAGAGGAATTTTAGGTTCAATCCTTCTAGGAATACAAGAATATTTCATCACCCAACCGTGGGGGATTTTGAGTTACAGCATTTGTCTGACGGCGTGGCTATTACTAATCTTGAAGAACGTATAATCCAGCACTTAGCAGCTTCTGCTGCTGCAATGGAGCGAGAGCGTCACATTGTTAGAAGGGAAGGTCAGAGTCGCAGGCCATCAGCTCAAGGATCTGGATATGCTGCAAATCATCAGGGATCATCTTACAGCAATAGGAGATCTCCTAGTCTGTCTTCTCCCAGTACTCAAGACAGAGCAAGTCCATCAGAACTCCAATTATTTCCAGAATCTCTCAAGTCTAGACTAAATGCAGTGTCAATGAGATACAAAGAGTCTATTTCCAAGAGCACAAGAGGGTGGAAAGATAGATGGTTCTCTGGTACTACATCTATGTCAGATTTGGGATCTGAAGTCAAGAAAGAAGTTAATGCAGGAATTGCCACTATTTCACGCATGATAGAACGTCTGGAAACAAGAGATACTAATAGAACCAGCGACAATTTTGCACCAAATAATATAGAGGATGGTTTAGTTCCGGGATCAAATAACCAGCATTTAACAAACACTGAAGGTGACAATCTTTCAAGAGACAACACAAAAGCATGTTGTGCTGCAGGTTCTAGTTCAAATTAA 981 0.4363 MDFSIFMEDPGMVEKKEIEAHLTSAAAFVEGGVQDSCDDACSICLEGFSITDPFSVTNCKHAFHLQCILEWCQRSSQCPMCWQAISLKDPTSQELLEAVERERNFRFNPSRNTRIFHHPTVGDFELQHLSDGVAITNLEERIIQHLAASAAAMERERHIVRREGQSRRPSAQGSGYAANHQGSSYSNRRSPSLSSPSTQDRASPSELQLFPESLKSRLNAVSMRYKESISKSTRGWKDRWFSGTTSMSDLGSEVKKEVNAGIATISRMIERLETRDTNRTSDNFAPNNIEDGLVPGSNNQHLTNTEGDNLSRDNTKACCAAGSSSN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0409 326 MobiDBLite consensus disorder prediction 278 314 - -
Lan7g0409 326 ProSiteProfiles Zinc finger RING-type profile. 41 81 IPR001841 -
Lan7g0409 326 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 9 173 - -
Lan7g0409 326 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 169 325 - -
Lan7g0409 326 SUPERFAMILY RING/U-box 35 89 - -
Lan7g0409 326 MobiDBLite consensus disorder prediction 279 314 - -
Lan7g0409 326 MobiDBLite consensus disorder prediction 161 210 - -
Lan7g0409 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 9 173 - -
Lan7g0409 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 169 325 - -
Lan7g0409 326 MobiDBLite consensus disorder prediction 167 210 - -
Lan7g0409 326 Pfam Ring finger domain 40 81 IPR001841 -
Lan7g0409 326 SMART ring_2 41 81 IPR001841 -
Lan7g0409 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 96 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0409 Lan-Chr7 2883558 2887558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0409 38 89 C3H Transcription Factor Family AT4G00335 42.308 2.08e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0409 K19043 - qsu:112039781 378.637