Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan7g0409 | ATGGATTTTTCAATCTTCATGGAGGACCCGGGGATGGTAGAGAAGAAGGAGATCGAGGCACATTTGACTTCAGCCGCTGCTTTTGTGGAAGGTGGAGTCCAGGATTCTTGTGACGACGCTTGCAGCATATGTCTTGAAGGCTTCTCAATTACTGATCCTTTCTCGGTGACGAATTGCAAACACGCATTTCATCTTCAGTGCATTCTAGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAGGCCATCAGTCTCAAAGATCCAACCAGCCAGGAATTACTCGAGGCAGTGGAGAGAGAGAGGAATTTTAGGTTCAATCCTTCTAGGAATACAAGAATATTTCATCACCCAACCGTGGGGGATTTTGAGTTACAGCATTTGTCTGACGGCGTGGCTATTACTAATCTTGAAGAACGTATAATCCAGCACTTAGCAGCTTCTGCTGCTGCAATGGAGCGAGAGCGTCACATTGTTAGAAGGGAAGGTCAGAGTCGCAGGCCATCAGCTCAAGGATCTGGATATGCTGCAAATCATCAGGGATCATCTTACAGCAATAGGAGATCTCCTAGTCTGTCTTCTCCCAGTACTCAAGACAGAGCAAGTCCATCAGAACTCCAATTATTTCCAGAATCTCTCAAGTCTAGACTAAATGCAGTGTCAATGAGATACAAAGAGTCTATTTCCAAGAGCACAAGAGGGTGGAAAGATAGATGGTTCTCTGGTACTACATCTATGTCAGATTTGGGATCTGAAGTCAAGAAAGAAGTTAATGCAGGAATTGCCACTATTTCACGCATGATAGAACGTCTGGAAACAAGAGATACTAATAGAACCAGCGACAATTTTGCACCAAATAATATAGAGGATGGTTTAGTTCCGGGATCAAATAACCAGCATTTAACAAACACTGAAGGTGACAATCTTTCAAGAGACAACACAAAAGCATGTTGTGCTGCAGGTTCTAGTTCAAATTAA | 981 | 0.4363 | MDFSIFMEDPGMVEKKEIEAHLTSAAAFVEGGVQDSCDDACSICLEGFSITDPFSVTNCKHAFHLQCILEWCQRSSQCPMCWQAISLKDPTSQELLEAVERERNFRFNPSRNTRIFHHPTVGDFELQHLSDGVAITNLEERIIQHLAASAAAMERERHIVRREGQSRRPSAQGSGYAANHQGSSYSNRRSPSLSSPSTQDRASPSELQLFPESLKSRLNAVSMRYKESISKSTRGWKDRWFSGTTSMSDLGSEVKKEVNAGIATISRMIERLETRDTNRTSDNFAPNNIEDGLVPGSNNQHLTNTEGDNLSRDNTKACCAAGSSSN* | 327 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan7g0409 | 326 | MobiDBLite | consensus disorder prediction | 278 | 314 | - | - | |
Lan7g0409 | 326 | ProSiteProfiles | Zinc finger RING-type profile. | 41 | 81 | IPR001841 | - | |
Lan7g0409 | 326 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 9 | 173 | - | - | |
Lan7g0409 | 326 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 169 | 325 | - | - | |
Lan7g0409 | 326 | SUPERFAMILY | RING/U-box | 35 | 89 | - | - | |
Lan7g0409 | 326 | MobiDBLite | consensus disorder prediction | 279 | 314 | - | - | |
Lan7g0409 | 326 | MobiDBLite | consensus disorder prediction | 161 | 210 | - | - | |
Lan7g0409 | 326 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHF2A | 9 | 173 | - | - | |
Lan7g0409 | 326 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHF2A | 169 | 325 | - | - | |
Lan7g0409 | 326 | MobiDBLite | consensus disorder prediction | 167 | 210 | - | - | |
Lan7g0409 | 326 | Pfam | Ring finger domain | 40 | 81 | IPR001841 | - | |
Lan7g0409 | 326 | SMART | ring_2 | 41 | 81 | IPR001841 | - | |
Lan7g0409 | 326 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 30 | 96 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan7g0409 | Lan-Chr7 | 2883558 | 2887558 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan7g0409 | 38 | 89 | C3H Transcription Factor Family | AT4G00335 | 42.308 | 2.08e-11 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan7g0409 | K19043 | - | qsu:112039781 | 378.637 |