Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0403 ATGGGTGTCTCTGGGAAGTGGATTAGAGCATTAGTTGGTCTAAAGAAATCAGACAAGCCAGAATCTTCGGAGAAGGATGGAAGTAAGGTCAACAAGTTTCGGCATCGAAGAAAGAATTCCATCGAAATTGACAATAGTAAACTTCAAAATGAGTCTGATAAAGGCAGTATTCCACCAATTGGAGATGCAGACGCCTCTTCAAATTGTTATGTCCATCATTCACCTTCCACTTCACAACAAGCACAGGTTGTTGCAATTAATCAACAAATCACAAGAGAGGAATGGGCTGCAACACGCATTCAAACTGCATTTCGAGGATTTCTGGCAAGAAGAGCTCTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGGGGCCATGCGGTGAGAAAACAAGCAGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTAGGGCAAGGCATGTTCGCTTGGCATTGGAAGGTGAAACTTCACAACAGAAACTTCAGCAACAGCTTGTAAACGAAGCTCGTGTTCGAGAAACAGAAGAAGGTTGGTGTGATAGTGTGGGTTCTGTTGAACAAATTCAAGCCAAAATATTAAAGAGACAGGAGGCTGCAGCCAAACGCGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAAGCAGGATCAAGGCAGCAGGCTATTGCCTCTGGATTTGAACCGGATAAAAGTAGTTGGGGTTGGAACTGGTTGGAAAGATGGATGGCAGTACGTCCTTGGGAGAACCGCTTTCTTGACATCAATACAAGGGACGGAGTAATGGGAGATGAAGATGGAGCTATGGAGGGAAAACATGGAATCAAGCCTCAGTTTAGATCTGCTAACACAGAACCAGTTCCATTAAATAATCTTCCGAACCTTGCCAGTCAGAAAGCTGGTCCCTCTCTTTCTGATGGTTGTGATTCTTCACCTAATAAGTCAGCAGGTTTTGTAGATTCATCAAACACACAGTATGTTAAGCCAAAGTCTAATGTCAATGTTCAAAATCCTGTTGATGAAGCAAACTCAAGACCTGAAATTCGGTCGAGATCTCATAGTAATCCAAAGGAGAGAACCACACGGTTAGATAAACAAGCAAAAAAGCGATTATCTCTTCCTAACAATGGGGGAGGTCCCACTATAACTAATGCGAAAGGGACACGTACTGCGCAAAGGCCTACAAGGGATAAACCTAAGGTCAATGGAGGTGGTAATGTGAATCATACTAAATCTGTTATAGAGTCCACTGTTATGTAG 1287 0.4375 MGVSGKWIRALVGLKKSDKPESSEKDGSKVNKFRHRRKNSIEIDNSKLQNESDKGSIPPIGDADASSNCYVHHSPSTSQQAQVVAINQQITREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARHVRLALEGETSQQKLQQQLVNEARVRETEEGWCDSVGSVEQIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQAIASGFEPDKSSWGWNWLERWMAVRPWENRFLDINTRDGVMGDEDGAMEGKHGIKPQFRSANTEPVPLNNLPNLASQKAGPSLSDGCDSSPNKSAGFVDSSNTQYVKPKSNVNVQNPVDEANSRPEIRSRSHSNPKERTTRLDKQAKKRLSLPNNGGGPTITNAKGTRTAQRPTRDKPKVNGGGNVNHTKSVIESTVM* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0403 428 PANTHER IQ-DOMAIN 5-RELATED 2 393 - -
Lan7g0403 428 PANTHER IQ-DOMAIN 5-RELATED 2 393 - -
Lan7g0403 428 MobiDBLite consensus disorder prediction 353 378 - -
Lan7g0403 428 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Lan7g0403 428 MobiDBLite consensus disorder prediction 14 59 - -
Lan7g0403 428 MobiDBLite consensus disorder prediction 414 428 - -
Lan7g0403 428 MobiDBLite consensus disorder prediction 273 428 - -
Lan7g0403 428 MobiDBLite consensus disorder prediction 14 30 - -
Lan7g0403 428 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Lan7g0403 428 SMART iq_5 115 136 IPR000048 GO:0005515
Lan7g0403 428 SMART iq_5 92 114 IPR000048 GO:0005515
Lan7g0403 428 MobiDBLite consensus disorder prediction 385 399 - -
Lan7g0403 428 MobiDBLite consensus disorder prediction 292 352 - -
Lan7g0403 428 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Lan7g0403 428 Gene3D - 93 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0403 Lan-Chr7 2795823 2823672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0403 1 386 IQD Protein Family AT3G22190 58.270 2.66e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0403 - - lang:109325503 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0403 7 2795823 2823672 Lan7g0403 7 2795823 2823672 ECH