Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0400 ATGGATGTTGATTCCTCTATGACGCCGGATTCCGATCACGATCCGGCGGTGCTCAACCAGGCTGATTCGGAGGATAGGGAGAGCCAAGGGGAGTCGCCTTCAGGCGGAGGATCTCCGGCGACTCCTCAGCTTCAACAGCAACCGCCGGTGCTTCAGCAGCAGACAGGGCCTGGTGCTCAGGTGCAGCAGAATCCGGTCGCCGGTCCTAGGCTCGCTCCAACTTACTCGGTAGTGGATGTGATTTTGGAGAAGAAAGAGGATGGGCCGGGGCCGCGGTGTGGCCACACGTTGACGGCAGTGGCGGCTGTCGGAGAAGAAGGCACGCCGGGGTACATTGGTCCTAGGTTGATTTTGTTTGGTGGTGCCACCGCGCTTGAAGGGAATTCTGCTGCCTCAGGGACTCCTTCATCGGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACAGCTGACGTCCACTGTTATGATGTCTTGAGTAATAAATGGTCTAGGATAACTCCCTTTGGAGAGCCCCCAACGCCAAGAGCTGCACATGTGGCAACTGCTGTGGGAACGATGGTAGTTATTCAGGGCGGTATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTTACTCAGCAACGGCCACGATGGCATAGAGTTGGTGTTCCAGGCCCTGGACCAGGGCCACGTTATGGACATGTAATGGCTTTGGTAGGGCAGAGATATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCATTGGATACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGCCCACCTCCATGCATGTATGCAACTGCAAGTGCCCGCTCTGATGGGCTTCTTCTGCTCTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCAAGTGCGTATGGGCTTGCTAAGCATAGAGACGGTCGTTGGGAATGGGCAATTGCCCCTGGTGTATCACCTTCTTCGAGATACCAGCATGCAGCGGTATTTGTTAATGCAAGACTCCATGTGTCTGGTGGGGCTCTTGGCGGAGGGCGGATGGTAGAAGACTCATCAAGTATTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACTAGTCCGAGAACTGGTAGATACAGTGCTGATGCACCTGGTGGAGATGCCGCAGTTGAGTTGACACGTCGTTGTAGGCATGCTGCTGCTGCTGTTGGTGACTTAATTTTTATTTATGGTGGTTTACGTGGTGGAGTTTTGCTGGATGACCTACTTGTTGCCGAGGATCTTGCTGCTGCTGAAACAACTGCTGCTGCTTCACATGCTGCAGCAGCAGCAGCTGCGTCTAATGTACAAGTGGGGCGACTACCTGGACAATATGGATTTGTTGATGATACGACAAGGCAAACAATACCTGAAGCAGATGCTGATGGTGCAGTTGTTTTGGGCAATCCAGTTGCTCCCCCTGTAAATGGTGACATGTATACTGATATCAGCACCGAAAATGCCATGCTTCAGGGGTCTAGAACATTCAACAGGCGAACTAGCAAAGGTGTTGAGTATCTGGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCACGACAAGAGAATGGAGAAGTTGAGTTGCCGGACAGAGACTGTGGGGCTGAGGCTACCCCTAGTGGGAAACAAATCTCTTCTTTGATTAAACCTGATTCTTCAGGGCCAAATAACATCACTCCTGGTGGAGTTAGGCTACATCATAGAGCTGTGGTTGTTGCCGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCGATTGATCAGTTTGAAAATGAAGGCAGGCGGGTCAGTTATGGGACTCCAGAAAATGCAACCGCTGCTCGGAAGTTATTAGATCGGCAGATCTCTATCAGTAGTGTCCCAAAGAAGATCATAGCACACCTCTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGCAGGCAGTTTTTCTTAGATTGCAATGAAATTGCCGATCTTTGTGATACTGCAGAGCGGATATTTTCAGGTGAACCAAGCGTCATACAACTTAGGGCGCCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTTATGCGCCTGTTTGATGAGTATGGTGCACCATCAACTGCTGGCGACATAGCATATATTGATTATCTATTCCTAGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGCCTTCTGCTTGCTTTGAAGGTTGAATATCCAAACAATGTTCATTTAATACGTGGAAACCATGAAGCTGCTGACATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCACCGGATAAACCGTCTGTTTAATTGGCTTCCTTTGGCAGCTCTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGCCGTTCTATAAATCATGTGGAACAGATTGAAAATATTCAGCGTCCGATTACGATGGAAGCAGGATCCATAGTGCTTATGGATCTATTGTGGTCTGATCCTACGGAAAATGACAGTGTGGAAGGATTGCGGCCAAATGCGAGAGGGCCAGGTTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATCGTTCGCGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGGCATTTGATCACTCTTTTCTCAGCTACAAACTACTGTGGTACTGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTTGTTGTTGTTCCTAAACTGATTCATCCATTACCACCTGCAATTTCTTCACCAGAAATGTCACCAGATCACCATATTGAAGATACCTGGATGCAGGAGTTGAATGCTAACAGACCAGCAACACCGACTAGAGGTCGTCCTCAAGTACCAAATGACCGAGTGTCATGTATATAG 3027 0.4886 MDVDSSMTPDSDHDPAVLNQADSEDRESQGESPSGGGSPATPQLQQQPPVLQQQTGPGAQVQQNPVAGPRLAPTYSVVDVILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLSNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSIAVLDTAAGVWCDTKSVVTSPRTGRYSADAPGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASNVQVGRLPGQYGFVDDTTRQTIPEADADGAVVLGNPVAPPVNGDMYTDISTENAMLQGSRTFNRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDCGAEATPSGKQISSLIKPDSSGPNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQISISSVPKKIIAHLLKPRGWKPPVRRQFFLDCNEIADLCDTAERIFSGEPSVIQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPEMSPDHHIEDTWMQELNANRPATPTRGRPQVPNDRVSCI* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0400 1008 Pfam Galactose oxidase, central domain 227 280 - -
Lan7g0400 1008 SUPERFAMILY Kelch motif 147 436 IPR015915 GO:0005515
Lan7g0400 1008 MobiDBLite consensus disorder prediction 30 62 - -
Lan7g0400 1008 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1008 - -
Lan7g0400 1008 MobiDBLite consensus disorder prediction 988 1008 - -
Lan7g0400 1008 Gene3D - 649 986 IPR029052 -
Lan7g0400 1008 ProSitePatterns Serine/threonine specific protein phosphatases signature. 776 781 IPR006186 GO:0016787
Lan7g0400 1008 SMART pp2a_7 679 963 IPR006186 GO:0016787
Lan7g0400 1008 MobiDBLite consensus disorder prediction 1 70 - -
Lan7g0400 1008 PIRSF STPPP_BSU1 42 1008 IPR012391 GO:0004721|GO:0009742
Lan7g0400 1008 Gene3D - 73 199 IPR015915 GO:0005515
Lan7g0400 1008 Gene3D - 200 460 IPR015915 GO:0005515
Lan7g0400 1008 MobiDBLite consensus disorder prediction 571 591 - -
Lan7g0400 1008 CDD MPP_Bsu1_C 659 961 IPR041758 -
Lan7g0400 1008 MobiDBLite consensus disorder prediction 554 593 - -
Lan7g0400 1008 Pfam Kelch motif 334 379 IPR011498 GO:0005515
Lan7g0400 1008 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1008 - -
Lan7g0400 1008 PRINTS Serine/threonine phosphatase family signature 707 734 IPR006186 GO:0016787
Lan7g0400 1008 PRINTS Serine/threonine phosphatase family signature 742 769 IPR006186 GO:0016787
Lan7g0400 1008 PRINTS Serine/threonine phosphatase family signature 775 799 IPR006186 GO:0016787
Lan7g0400 1008 PRINTS Serine/threonine phosphatase family signature 813 839 IPR006186 GO:0016787
Lan7g0400 1008 PRINTS Serine/threonine phosphatase family signature 843 870 IPR006186 GO:0016787
Lan7g0400 1008 PRINTS Serine/threonine phosphatase family signature 903 923 IPR006186 GO:0016787
Lan7g0400 1008 PRINTS Serine/threonine phosphatase family signature 925 941 IPR006186 GO:0016787
Lan7g0400 1008 Pfam Calcineurin-like phosphoesterase 707 914 IPR004843 GO:0016787
Lan7g0400 1008 SUPERFAMILY Metallo-dependent phosphatases 663 969 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0400 Lan-Chr7 2771627 2783326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0400 671 906 Calmodulin-binding Proteins AT5G63870 29.412 2.67e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0400 - - gmx:100788485 1744.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0400 7 2771627 2783326 Lan7g0400 7 2771627 2783326 ECH
Lan7g0400 7 2771627 2783326 Lan8g1573 8 22738615 22756862 LSH
Lan7g0400 7 2771627 2783326 Lan13g0452 13 3310389 3324950 LSH
Lan3g0014 3 162623 172853 Lan7g0400 7 2771627 2783326 PCT
Lan7g0400 7 2771627 2783326 Lan3g0014 3 162623 172853 PCT