Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0398 ATGTTTGTCCGATACAGTACAATACAATTAATTATGGCAGAAATTGAAGTTCCTCAATATTTTGTTTGTCCTATTTCTCTTCAAATCATGAAGGATCCTGTGACTGCAGTAACAGGCATAACATACGACAGAGAAAGCATCGAGCAGTGGTTGCTCAAATCCAAAAATTGCATGTGCCCAGTTTCAATGCAACCACTGCCAAGAAGTTCTGAGTTCTTAATTCCCAACCACACGCTACTCAGGCTAATTCATGCATGGTGTTTAGCAAACGAAGCTAAACGTGTTGATCAAATTCTAACCTCAGTAATTCCTCTTGATAAGACCCATGTTCAGAAACTTGTTAGGGATCTTGAGGTTCCTCATTTGTATCAATCTGTGTTGGAGAGGATGATTGTTTTGGCCACAGAGAGCGAGAGGAACAGAATGTGCATGGTAGAGGAGGGAGTAACCAAGACCATGGTTATGCTGATAAACAAGAGTTTCAAAGAAGGTAAAACAACGTGCTTAGAAGAAGTTATCAAAATTCTTCGTCTTCTTTGGAATACTCAAACTATGGCCCACAGCAACATGCAACCTCTTATTGGAGACTTCATCAAGTCGTTGACTTGGATTTTGAAACTTAAAGTGGATAATAATGTAAAGTTGGTAAACAAAGCAATGCCTCTATTGAAATCTACAATCGAAGTCTACGATTCAAACCGGTTAGGGAGTTTAAACATTGAATTCTTCAGAGAAATGGTTACAGTACTGAGAAAGAAGAAATCACTCTCTCAACCAGCTATAAAATCTGCATTGCATGTACTTATAGAAACATGCCCTTTGGGTAGAAACAGAACGAAGATCGTGGAAGCAGGTGCAGTCAAAGAACTCATCGAGATTGAGCTAGAAAAACCAGAGAATAAGAACATAACAGAACTCGTATTTAACCTTCTAGCACATCTTTGTTCTTGTGTTGAAGGAAGAAAACAGTTTCTTTTGCATGCAGCGGGTATAGCAATGACTTCAAAGAGGATTCTGAGGGTTTCTCATGCAACTGATGATAGAGCAATTCATATATTTGCATTGATTGCTAAGTATTCAGGATCGAATGAAGTGGTTCGAGAGATGTTAAGGGTTGGAGCAGTATCAAAACTTTGCATGGTAATGCAGGCAGATTGTGCTTCATATTTGAAAGAAAAAGCAAGGGATATCGTTAGGTTACACTCCAAAGTTTGGAACAGTTCTCCTTGTATACATGTATATTTGCTAACTAGAGATCAAAGGTGA 1266 0.3855 MFVRYSTIQLIMAEIEVPQYFVCPISLQIMKDPVTAVTGITYDRESIEQWLLKSKNCMCPVSMQPLPRSSEFLIPNHTLLRLIHAWCLANEAKRVDQILTSVIPLDKTHVQKLVRDLEVPHLYQSVLERMIVLATESERNRMCMVEEGVTKTMVMLINKSFKEGKTTCLEEVIKILRLLWNTQTMAHSNMQPLIGDFIKSLTWILKLKVDNNVKLVNKAMPLLKSTIEVYDSNRLGSLNIEFFREMVTVLRKKKSLSQPAIKSALHVLIETCPLGRNRTKIVEAGAVKELIEIELEKPENKNITELVFNLLAHLCSCVEGRKQFLLHAAGIAMTSKRILRVSHATDDRAIHIFALIAKYSGSNEVVREMLRVGAVSKLCMVMQADCASYLKEKARDIVRLHSKVWNSSPCIHVYLLTRDQR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0398 421 PANTHER WDSAM1 PROTEIN 14 418 IPR045185 GO:0061630
Lan7g0398 421 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 14 418 - -
Lan7g0398 421 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 84 IPR013083 -
Lan7g0398 421 SMART Ubox_2 20 86 IPR003613 GO:0004842|GO:0016567
Lan7g0398 421 CDD RING-Ubox_PUB 21 64 IPR045210 -
Lan7g0398 421 SUPERFAMILY RING/U-box 14 96 - -
Lan7g0398 421 Pfam U-box domain 17 91 IPR003613 GO:0004842|GO:0016567
Lan7g0398 421 ProSiteProfiles U-box domain profile. 16 93 IPR003613 GO:0004842|GO:0016567
Lan7g0398 421 Gene3D - 85 405 IPR011989 -
Lan7g0398 421 SUPERFAMILY ARM repeat 66 397 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0398 Lan-Chr7 2744810 2746802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0398 14 411 U-box Gene Family AT2G35930 38.060 5.08e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0398 - - lang:109351746 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0398 7 2744810 2746802 Lan8g1575 8 22776501 22778007 LSH