Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0392 ATGGAGTCACGGATGGATCAGTATGAGATCATGGAGCAGATTGGTCGAGGAGCTTTTGGTGCTGCTATTCTTGTTAATCACAAGGCCGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTTGCAAGGCAGACTGAAAGATGCAGAAGATCTGCTCATGAAGAAATGGCTCTAATTGCTCGAATCCAGCACCCTTACATTGTGGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACTGGGTACTGTGAAGGTGGAGACATGGCTGAACTAATGAAAAGATCAAATGGTACTTACTTTCCTGAAGAGAAACTATGCAAATGGTTCACTCAAATACTCTTAGCAGTGGAATACCTGCATTCAAATTATGTTTTACATCGTGACCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCACGATGTTCGCTTAGGGGATTTTGGGCTGGCAAAAACTCTAAAGGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATTTAAATCTGATATTTGGTCACTGGGGTGCTGTATATATGAGATGGCTGCTCATCGCAATGCTTTTAAAGCTTTTGATATGGCAGGACTGATAAGCAAGATAAACCGTTCCTCTATCGGCCCCTTGCCTCCATGTTACCCCCCTTCCTTGAAAATATTGATAAAGAGCATGTTGAGAAAAAGTCCTGAGCATAGACCAACAGCATCTGAGGTGTTAAAGCACCCTTATTTGCAACCTTACGTTGTTCAATATCGGCCATCTTTCAATCCTCCTCCAATATCCCGTTCTCCTGAAAAACCAATTTCTTCTGCACATCGCCCTCGAAAAAATAAAGCTGAAAGTCAAAACAGTAATAGTTCAAGCAGTGACAAAGATAGTCTGATGTTAAATGAGAGAAACATTGGCACATCAGTGCCAAAATGTGATAACAAAGGCACTGACACAGATGCGACATTAATAGATGATGATGGCTCAGAGCATCGCCTTCCTTGTGAGGAAGAAAGTAGCGCTAGCAATACCAATGCAAATACCAAATCAGTTGAACAAAAGGTGATGAAACCATCTCATAATGGACAGTGTTCTAATATCGGTACTAAGCAGCCAAAAACAATTAGGAATATAATGATGGCATTAAAAGAGGAAAAAGTTAGAGAAACAACTTCTCCAATGAGAGGTACTCGCGTAAAGGCTGGTGGTCTACCAACACAGAAAATAAATACAGAGACGTTGTCCAAATTGCCTAAGCCTATTTTCGATTCTCCCTGTTCGAAGCCTAATTTAGAGTCACCATCTGCTGCACTTGCAAAGGCAACCCCTGATTCTGCAAAGCGAATACCGGGTTCACACCCTTCAAAGCATCAGTTACCTATGACAGAATTCACACCAAAAATTAAACCAAGACATGATTTCACTCCACCACCTGCTCTTATTAAACAAATAGAAGGAGATGGAGTTCCTTCCAAGCCAAGGCTAAGAACTCCTCCAAGATTACTTAGACAACCTTCATTTCCTGCAAGCACGAGGTTGGCTGGGGTTGATGTTCCAAATTGTGCAAATGACACTGAAAAGCTATCTCCAAATAAAATAGCTCAGGCGCCTGCGATAATCCGTCGTCAATTGACTAATGGAAATGTACCAATTTTTAGACAGCCTCAGAAGGATTTTGGAAGAAGTTCCAAAGGAATGCAAACAGACAGCAGTAATTCCGCATCATCTTCAGTCTCTATGCAAGGATTTGAACTTTCTGATGATGCAACAACTTTTATTGACTTGATAGAACAGACAATTCCTGATAATGCGAGTGAAGGCGTGGAATCAAGTCCTGAGAGCATGCCACCTGCAACCTTTTCACATTGTAAGATGGTTGAACAGGTGTCCAGAGAAACCCTTGAGGTTGCCCTGAATTTTGATAAAAATATTAGCAAAAATGAGAAAGTTAGTCTCAGTTTAACTCTTGATCACCTCGTTGAAGATTCTAAGGTCGACGATGGTCTTCACATAAATCAGACTACTATATCTACTGCCTCCGGTTGTGGTAATATACCTGTTGATCACCCTGCTGAAGCCACACAAAAAGATCCTCAAGATATTTCTACATCAAGCAAGTCTGATACAGTTAACCAGCCAAAACTAGTGTGTAAATCATCTGGTGATGACAAATTTACAGTGAGGGAGCGATTGTCGATGGTGGCAGAAACTGCTCCACCGATTACCACTACTAAAATTCCAAGCCAGAAAGCTTTGCAAGAGAAAGGAACCGTATCGCAGAATCCAGCACAAGAAAAGCCAGATGCTGGCCATCTTCCTCCAGCCTTTGATGATGTCATCCATGTTATTCGCCATAGCAGTTACCGCGTTGGGAGTGAGCAGCAACAGCCAGTAAAGGAAACTGTGGAGAAGGGAGTTCAAAATGTAGATGTTGGTAAGTTTATTAACAGCTTGAGGGATGATTTAGAAATGAGAAACATGAGCTCTCCTATGACCCTTAAATCTTCAAGTTGCTCTGAAGCTGCAAGCATGAAATCAAATATTTCTGATCAGTGTGAAATGAGAAACATGAGCACTCCCGCTAGCCTTAAATCCTCAAGTTTCTTTGATGCTTTGAGCTCGAAATCGTGTATTTCTGATCATCCCGGTCTTAAGGAACAGGATATATGTAACCCTGTTTCTTTAGTTTCAGAATCTGATTCTACTGAGTTAAGTAAAAATAGCACTCCAGTGACTGAAGAGAAACCACCACAAGCAAAGGAAATATTGGATGTCAAATCTTTCAGGCAGAGAGCAGAGGCACTTGAAGAGCTCTTAGAATTATCTGCAGATTTGTTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCCTTTGGGAAAGATAAGGTTTCTCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTTAAAGGAATGTCATTTGAGGAAAGCGGAGGACGATGTTCATGA 3021 0.4144 MESRMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHEEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKRSNGTYFPEEKLCKWFTQILLAVEYLHSNYVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRNAFKAFDMAGLISKINRSSIGPLPPCYPPSLKILIKSMLRKSPEHRPTASEVLKHPYLQPYVVQYRPSFNPPPISRSPEKPISSAHRPRKNKAESQNSNSSSSDKDSLMLNERNIGTSVPKCDNKGTDTDATLIDDDGSEHRLPCEEESSASNTNANTKSVEQKVMKPSHNGQCSNIGTKQPKTIRNIMMALKEEKVRETTSPMRGTRVKAGGLPTQKINTETLSKLPKPIFDSPCSKPNLESPSAALAKATPDSAKRIPGSHPSKHQLPMTEFTPKIKPRHDFTPPPALIKQIEGDGVPSKPRLRTPPRLLRQPSFPASTRLAGVDVPNCANDTEKLSPNKIAQAPAIIRRQLTNGNVPIFRQPQKDFGRSSKGMQTDSSNSASSSVSMQGFELSDDATTFIDLIEQTIPDNASEGVESSPESMPPATFSHCKMVEQVSRETLEVALNFDKNISKNEKVSLSLTLDHLVEDSKVDDGLHINQTTISTASGCGNIPVDHPAEATQKDPQDISTSSKSDTVNQPKLVCKSSGDDKFTVRERLSMVAETAPPITTTKIPSQKALQEKGTVSQNPAQEKPDAGHLPPAFDDVIHVIRHSSYRVGSEQQQPVKETVEKGVQNVDVGKFINSLRDDLEMRNMSSPMTLKSSSCSEAASMKSNISDQCEMRNMSTPASLKSSSFFDALSSKSCISDHPGLKEQDICNPVSLVSESDSTELSKNSTPVTEEKPPQAKEILDVKSFRQRAEALEELLELSADLLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMSFEESGGRCS* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0392 1006 MobiDBLite consensus disorder prediction 710 730 - -
Lan7g0392 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lan7g0392 1006 MobiDBLite consensus disorder prediction 496 520 - -
Lan7g0392 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 752 989 - -
Lan7g0392 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 562 - -
Lan7g0392 1006 MobiDBLite consensus disorder prediction 574 592 - -
Lan7g0392 1006 MobiDBLite consensus disorder prediction 694 731 - -
Lan7g0392 1006 MobiDBLite consensus disorder prediction 761 778 - -
Lan7g0392 1006 CDD STKc_Nek 7 262 - -
Lan7g0392 1006 Gene3D Transferase(Phosphotransferase) domain 1 90 328 - -
Lan7g0392 1006 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Lan7g0392 1006 MobiDBLite consensus disorder prediction 565 592 - -
Lan7g0392 1006 MobiDBLite consensus disorder prediction 272 383 - -
Lan7g0392 1006 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0392 1006 SUPERFAMILY Protein kinase-like (PK-like) 4 294 IPR011009 -
Lan7g0392 1006 MobiDBLite consensus disorder prediction 298 329 - -
Lan7g0392 1006 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Lan7g0392 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 752 989 - -
Lan7g0392 1006 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 562 - -
Lan7g0392 1006 MobiDBLite consensus disorder prediction 332 351 - -
Lan7g0392 1006 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0392 1006 MobiDBLite consensus disorder prediction 761 787 - -
Lan7g0392 1006 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0392 1006 MobiDBLite consensus disorder prediction 352 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0392 Lan-Chr7 2655909 2662445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0392 14 263 MAP Kinase Kinase Kinase AT1G53570 30.588 1.87e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lan7g0392 Pkinase 3.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0392 K08857 - gmx:100818747 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0392 7 2655909 2662445 Lan7g0392 7 2655909 2662445 ECH
Lan7g0392 7 2655909 2662445 Lan13g0446 13 3236604 3243294 LSH