Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0388 ATGTCTTCCAACAAGAAAGGTTTTCTAAGAACTGTGTTCACATCAAATGGAAGTTGTGGCTGTGGCAAAGCAAAACCATTTGAAGTACACGAACCTATCCCAAAATCTAAATTCTCCATTCATCATAACCAAAACACAAACCCAAGCTGCATGAGTTCTTCAACCACCACTTCCGGTGATTGCAACGGTGGTGTTTCCTCCAGGGAGAACGAAGAATTCACCTCCGCCGCCACCTCTGAACCCGACACAACAATCACACATGATCTTCATCATAACAACAACGACAACGTTGTACTAAAAAAGAGTCCTCTAATGGACAGTGTGGCAATTGAGAAGAACTCTTCGGATCCGTACCATGATTTCAGGCACTCCATGCTTCAAATGATATTTGAGAAAGAGATTGATTCAGAAGAAGACCTTCAGGATCTTCTTCAATGCTTTCTTCAGTTGAATGCTCCACGTTACCACGATGTCATTGTTGAAGTATTCAATGAGATATGTGAAGATGCGTTTTCTGATAAGGTTAGTAGTACTGCTGAAGGTAAGTGA 549 0.4153 MSSNKKGFLRTVFTSNGSCGCGKAKPFEVHEPIPKSKFSIHHNQNTNPSCMSSSTTTSGDCNGGVSSRENEEFTSAATSEPDTTITHDLHHNNNDNVVLKKSPLMDSVAIEKNSSDPYHDFRHSMLQMIFEKEIDSEEDLQDLLQCFLQLNAPRYHDVIVEVFNEICEDAFSDKVSSTAEGK* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0388 182 MobiDBLite consensus disorder prediction 45 95 - -
Lan7g0388 182 Pfam Transcriptional repressor, ovate 114 169 IPR006458 -
Lan7g0388 182 ProSiteProfiles OVATE domain profile. 110 169 IPR006458 -
Lan7g0388 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 176 IPR038933 GO:0045892
Lan7g0388 182 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 176 - -
Lan7g0388 182 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lan7g0388 182 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 108 167 IPR006458 -
Lan7g0388 182 MobiDBLite consensus disorder prediction 45 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0388 Lan-Chr7 2638560 2639616 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan7g0388 Ovate 7.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0388 - - gmx:102667780 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0388 7 2638560 2639616 Lan7g0388 7 2638560 2639616 ECH
Lan6g1858 6 29716030 29717587 Lan7g0388 7 2638560 2639616 PCT
Lan7g0388 7 2638560 2639616 Lan6g1858 6 29716030 29717587 PCT