Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0362 ATGTACCATCAAGGAAAGAACATTCATCCTTCTTCAAGAATATCAATCCCTTCTTCTGAGAGACACATGTTCCTTCAAACAGGAAATGGTTCTTCAGATTCTGGACTTGTACTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCAGATCTTCATGCTAGGTTTATAGAAGCAGTGCATCAGTTAGGTGGACCTGATAAAGCAACTCCAAAAACAGTGACTAAACTCATGGGAATTCCAGGGCTTACCTTATATCATCTCAAGAGTCATCTTCAGAAGTACAGATTGAGCAAGAATATGCATGGACAAAGCAACAACGTGACACACAAAATAACTACAAACCCAGGTGCAGAAACGAGAGAAAGAAGCTTTGAAAAGAACGAAACTAGTATGAACAATTTAGACCTTGCACCTGAAGCTAACAATGATTTACACATAAGTGAGGCACTGCAGATGCAGATAGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACTTACAGCTTCGCATAGAGTCCCAAGGAAAATATCTACAAGCAGTGCTAGAGAAAGCTCAAGAAACTCTTGGTAGACAGAACTTAGGAATAGTAGGACTTGAAGCTGCTAAAGTTCAACTTTCTGAGCTTGTGTCCAAAGTATCCTCTCAGACCCTGAACACAGCATTCTCAGAACTGAAGGAATTACAAGGATTTAGCCCAAACCAAACACAAAAAGACTTCTACATAGATAGTTGCATCACATCATGTGAGGGATCAAAAAAGGACCATGAATTCAAGTGGTGTAATGATCAAGTGAAAAAGAACAACTTTCTTTCCTCATTGGGAAATAATGTAGAAAGAAGTCCTAGCAACTTATCTATGAGCATTGGAATTGAAGGAGGGAAAGAGAATGGAAGTAGCATGTATCCAGAGAGAATAGTCCTCATTGGGAATCAGTTAGATGATGAATACAGACAAAGAAACTCAAATAGGACAGAACCAGTGAAACTAGTAGTGGCTGATGACAAAGTTTCACAAGATTATAGATTGTCTTCTTACTTTGCAGAAGCAAAACTGGACCTAAACAAGCTTGAAGATAATGAACCTGAAATAAATTGTCAAAAACTGGACTTGAATGGATTCAGTTGGAGCTGA 1146 0.3901 MYHQGKNIHPSSRISIPSSERHMFLQTGNGSSDSGLVLSTDAKPRLKWTPDLHARFIEAVHQLGGPDKATPKTVTKLMGIPGLTLYHLKSHLQKYRLSKNMHGQSNNVTHKITTNPGAETRERSFEKNETSMNNLDLAPEANNDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIESQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQTLNTAFSELKELQGFSPNQTQKDFYIDSCITSCEGSKKDHEFKWCNDQVKKNNFLSSLGNNVERSPSNLSMSIGIEGGKENGSSMYPERIVLIGNQLDDEYRQRNSNRTEPVKLVVADDKVSQDYRLSSYFAEAKLDLNKLEDNEPEINCQKLDLNGFSWS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0362 381 Pfam Myb-like DNA-binding domain 45 96 IPR001005 -
Lan7g0362 381 Coils Coil 148 168 - -
Lan7g0362 381 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Lan7g0362 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Lan7g0362 381 PANTHER MYB-RELATED PROTEIN 2 3 381 - -
Lan7g0362 381 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Lan7g0362 381 Gene3D - 42 100 - -
Lan7g0362 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 381 IPR044848 GO:0003700
Lan7g0362 381 MobiDBLite consensus disorder prediction 105 126 - -
Lan7g0362 381 Pfam MYB-CC type transfactor, LHEQLE motif 146 192 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0362 Lan-Chr7 2488947 2491776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0362 76 380 G2-like Transcription Factor Family AT3G04030 42.693 1.46e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan7g0362 Myb_DNA-binding 6.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0362 - - gmx:100810396 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0362 7 2488947 2491776 Lan8g1597 8 22944501 22947132 LSH
Lan3g0010 3 146412 150347 Lan7g0362 7 2488947 2491776 PCT
Lan7g0362 7 2488947 2491776 Lan3g0010 3 146412 150347 PCT