Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0350 ATGGAAATGTTAGGTATGGACGAGCGCACTGTAACATCAAACCCTAACGACAATGGCGAAGGAAGAGTGATGAAGAAGCCGAAGGTCGTTATCATCACGGGACCCACCGCTTCCGGAAAATCCAAACTTGCCGTCGATTTAGCTTCCTATTTCCCGATCGAAGTTATCAACGCTGATTCCATGCAACTCTACCGTGGTCTCGATGTTCTCACCAATAAAATCCCATTCTCACAACAAAATGGTGTGCCTCATCATTTGTTGGGTACTGTAAGCCCAAACGTAGAATTCACTGCTAAAGCGTTTCGAGATTCTGCTATTCCTATCATTGATGACATATTGGATCGCCATCACTTGCCTGTTATTGTTGGAGGTACAAATTACTATATCCAGGCTCTCGTGAGTCTGTTTCTTCTAGATGATTTGGCAGAAGATATGAATGAAAGCTGTTTGGACGACTTGCCTGGTGTTACACAGTCTGATAGCAGTTTCATTGCTGAAAATGACTCTTCAAATGATAGTTATAACCTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCACCCAAATAACCATAGAAAGATAAACCAATATATTAGCTTGTATGCTCGTACTGGTGTTCTTCCTAGCAAAGTTTTTCAAGGAAAGGCAGCAGAGAAGTGGGGTCAAGTTGATAACTTAAGATATGATTGCTGTTTCATAAGCGTGGATGCATCTCTCCCTGTACTCGACAGATATGTTGAGGAGAGGGTAGATTGCATGATGGATGCTGGATTACTGAATGAAGTCTATGACATGCACAATTTGGAAGCAGATTATACTAGAGGTTTGCGGCAAGCCATTGGTGTCCGTGAATTTGAGCCTGTTCTTAAAACTTGTGTTGTTGAAGACATTAGCAAAAAAGAGAAGGAATTGACTGAGGGGTCCAGCACAGAAATCGGTGAGACACTGTCTGATGGTAATCTGGTGGAGTGGTTGAAATCTTCCTCTGATAGTAAATCCATAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAAGTTAATACCCGGAGACTTGTTCGTCGTCAGAAAAGGATGCTCAACCGACTGCAAACACTGTTTGGTTGGAACATACACTATGTTGATTCAACGGAATCAATATCAAGCAAATCGGATGATGTATGGGCTAGCCAAGTGGTTGAATCTGCCATGAAGATAATTAGATCTTTCCTGAGTGAGAATGAAAGCTGGGCATCCACCGTTGAGTTGTCTAATTTGACTGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATTCATATGCAAGGCCTGTGGAGATCGTGTGCTTAGAGGATCACATGAATGGGAGCAACACAAACAAGGTCGTGGGCACCGAAAACGTGTTTCTAATCTCAAGAGCAAGGCACGGGGTCTTACTTTCGTGGATCAAAAGCTGGAGTATTCTGAATGCAACTAG 1461 0.4216 MEMLGMDERTVTSNPNDNGEGRVMKKPKVVIITGPTASGKSKLAVDLASYFPIEVINADSMQLYRGLDVLTNKIPFSQQNGVPHHLLGTVSPNVEFTAKAFRDSAIPIIDDILDRHHLPVIVGGTNYYIQALVSLFLLDDLAEDMNESCLDDLPGVTQSDSSFIAENDSSNDSYNLLKDIDPVAANRIHPNNHRKINQYISLYARTGVLPSKVFQGKAAEKWGQVDNLRYDCCFISVDASLPVLDRYVEERVDCMMDAGLLNEVYDMHNLEADYTRGLRQAIGVREFEPVLKTCVVEDISKKEKELTEGSSTEIGETLSDGNLVEWLKSSSDSKSIILLEEAIEKVKVNTRRLVRRQKRMLNRLQTLFGWNIHYVDSTESISSKSDDVWASQVVESAMKIIRSFLSENESWASTVELSNLTGMKIIQRDLWTQFICKACGDRVLRGSHEWEQHKQGRGHRKRVSNLKSKARGLTFVDQKLEYSECN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0350 486 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 409 - -
Lan7g0350 486 Gene3D Classic Zinc Finger 430 472 - -
Lan7g0350 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 270 IPR027417 -
Lan7g0350 486 Hamap tRNA dimethylallyltransferase [miaA]. 29 402 IPR018022 GO:0008033
Lan7g0350 486 Pfam IPP transferase 62 359 - -
Lan7g0350 486 Gene3D - 27 429 IPR027417 -
Lan7g0350 486 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 409 IPR039657 -
Lan7g0350 486 MobiDBLite consensus disorder prediction 1 22 - -
Lan7g0350 486 TIGRFAM miaA: tRNA dimethylallyltransferase 29 295 IPR018022 GO:0008033
Lan7g0350 486 Gene3D - 156 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0350 Lan-Chr7 2399477 2403208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0350 32 486 C2H2 Transcription Factor Family AT2G27760 56.209 2.45e-173 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0350 7 2399477 2403208 Lan7g0350 7 2399477 2403208 ECH