Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0347 ATGAGATTGGAGAAATGCTGGTTCTGTTCCTCAACTGTATACCCTGGACATGGAATTCAGTTTGTTCGTAATGATGCTAAGATTTTTCGATTCTGTAGATCTAAATGCCACAAGAACTTTAAAATGAAGAGAAATCCTCGTAAAGTAAAATGGACCAAGGCATATAGGCGGGTGCACGGAAAGGATATGACACAGGATTCGACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCAGAGAGATATGACAGGAATCTTACTGAGAATGTTCTCAAGGCCATTCCAAAGATTGATAAGATCAGAGTCAGCAGGGAGGAGCAGCACCATAAGAATAGGATGAAGGGCAAGAAGCAGAAGCTGCATAAGGAGGCGGCAAGGGAGTTGGAGCAGAGCATCAGTTTGGTCAAAGCTCCTTCTGTTTTTCAACAGGACCAGTCTCTCACTTTACCTAAGATCGTGGTCAGTGTTTCCCAACAACAATCAGAAAATCGCATGGAAGAGTGA 501 0.4331 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLTENVLKAIPKIDKIRVSREEQHHKNRMKGKKQKLHKEAARELEQSISLVKAPSVFQQDQSLTLPKIVVSVSQQQSENRMEE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0347 166 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Lan7g0347 166 SMART 4TRASH 6 44 IPR011017 -
Lan7g0347 166 PANTHER BNAA04G10330D PROTEIN 1 166 - -
Lan7g0347 166 PANTHER 60S RIBOSOMAL PROTEIN L24 1 166 IPR000988 -
Lan7g0347 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Lan7g0347 166 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Lan7g0347 166 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Lan7g0347 166 Coils Coil 109 129 - -
Lan7g0347 166 MobiDBLite consensus disorder prediction 103 124 - -
Lan7g0347 166 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0347 Lan-Chr7 2382475 2384805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0347 1 160 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 68.750 5.37e-79 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0347 K02896 - gmx:100793564 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0347 7 2382475 2384805 Lan7g0347 7 2382475 2384805 ECH