Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0343 ATGTCTGTTCCAATGGAGTTTTGGGGTGCTGAGGTTAAGGTAGGGCAGGTGGTTAAAGTTGATCAAAATGAACTACTTGGTGTAACAATCCACCTTTCTCAGATTGCTCTTGGTGAATCAAAGAAAGACAAAGCAAATGAACCTGTGATTATTTCCTTGAAAGTTGATGACAAGAAGTTTGTTTTGGGAACTCTTACTAGGGATGGCGTTCCTCAGTTTTCTCTGGATTTATATCTGGACTCGGAATTTGAGCTTTCTCACAATTCGAAAAATTCTAGTGTTTATTTTAGTGGATACAAAGTTGAAAATGACATCGATGACGTATCTGACTTTTCTGATAGTGATGAAGATATCCCATTGTTGACCAAAATTGATGGGAATAAAGTCGAGACTGCTGATCCAAAGAAAGACAACGAGAATGAATCTGATGATGACTCTGTCGATGAGGATGATTTTGGAAGTTCTGATGAGTTGGGTGCTAATAGTGATGATGAGATTGACAGTGATGAAGATGAATCTGAAGAAGAGACCCCTGTTAAGAAGGTGGATCAGAGCAAGAAGAGACCCAATGGACCTGCATCAAAAGCTCCAATTCCTGCCAAGAAAGCTAAAAATGCTACTCCTGAAAAGACCGATGGTGGTAAGAAAGGTGTACAAAAATCTACTCCCCACCCAGTGAAGAAGGGTGGAAAGAATTTTAACAAGAAAGGGCAACGCTCCTAA 723 0.3997 MSVPMEFWGAEVKVGQVVKVDQNELLGVTIHLSQIALGESKKDKANEPVIISLKVDDKKFVLGTLTRDGVPQFSLDLYLDSEFELSHNSKNSSVYFSGYKVENDIDDVSDFSDSDEDIPLLTKIDGNKVETADPKKDNENESDDDSVDEDDFGSSDELGANSDDEIDSDEDESEEETPVKKVDQSKKRPNGPASKAPIPAKKAKNATPEKTDGGKKGVQKSTPHPVKKGGKNFNKKGQRS* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0343 240 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Lan7g0343 240 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 233 - -
Lan7g0343 240 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 233 - -
Lan7g0343 240 Gene3D Nucleoplasmin core domain 2 106 - -
Lan7g0343 240 MobiDBLite consensus disorder prediction 142 174 - -
Lan7g0343 240 MobiDBLite consensus disorder prediction 116 141 - -
Lan7g0343 240 MobiDBLite consensus disorder prediction 110 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0343 Lan-Chr7 2352254 2355423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0343 5 217 C2H2 Transcription Factor Family AT3G44750 43.458 2.86e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0343 - - lang:109352045 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0343 7 2352254 2355423 Lan7g0343 7 2352254 2355423 ECH
Lan7g0343 7 2352254 2355423 Lan8g1623 8 23199974 23202386 LSH
Lan6g2032 6 31074413 31077149 Lan7g0343 7 2352254 2355423 PCT
Lan10g0163 10 1065766 1068531 Lan7g0343 7 2352254 2355423 PCT
Lan3g0116 3 807707 811695 Lan7g0343 7 2352254 2355423 PCT
Lan7g0343 7 2352254 2355423 Lan6g2032 6 31074413 31077149 PCT
Lan7g0343 7 2352254 2355423 Lan10g0163 10 1065766 1068531 PCT
Lan7g0343 7 2352254 2355423 Lan3g0116 3 807707 811695 PCT