Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0337 ATGTCTCGTCGCGGTGGTGGCAGTTACCAACCTGATCAACGCCGTGATCGCCCCTCTCCGGCGCAACCAACTCCCGCTGAAACTTCCGGAAGAGGTCGTGGCCGTGGACGCGGTGGTGGTCGTGGTGTTTCTGGTCAAGGCCGTGGAGCGACTCATGTTCCTTCGCCGGTGATAGGTTCTTCTTCCCCGGCGCCTGTGTTTGGTTCTCAACCTACGGCGCCGGTGATCGGTTCTTCTTTGCAAGCGCATGTTGTTTCCAGTGCTTCTAGTTCTGTGGCACCGCCCCCAGCGGCGGCTCCGACAACGGCTCCGACTTCAGTAGAAGCCATGAGTTCTGAGGTTGCGGAGCGGCTTACATTGCAACCGCCGGCGCCGTCGTCATCGAAGGCGGTTAGATTTCCTAACCGGCCAGGTTATGGGACACGTGGAAAGAAAATCAGAATCCGTGCAAATCATTTTCTCGTGCAAGTTGCTGACAGGGATTTACACCACTACGATGTGGAAATAAATCCTGAGGTTACTTCGAAGAAGGTTAATAGAGATATCATGAAACAATTGGTTGAAACATATCAAGAGACACATCTTGGTAAGCGCACACCAGCTTACGATGGCCGGAAGAATCTTTACACCGGAGGCGCATTACCGTTCTCATCAAAAGAGTTTGTTGTTAAGTTGGTTGATCAGGATCAACAACCACATTCTTCTGAAGGTTCAGCAAGTAAAAAACGTGAGCGTGAGTTTAAGGTGACCATCCGATTTGCTTCGAAGCCAGACCTGCATCATCTGCAGCAATTCCTTAGGCGCCAACAGTTGGACTCTCCACAAGAGACTATACAAGCTCTCGATGTTGTTTTGAGGGCAACACCTTCTTTGAAGTATAATGTTGTGGGGAGTTCATTTTTTTCACCGGATTTGGGGATAAGTGGTTCACGTGGCAGTGGGGTCGGCCCACTTGGCAGTGGTACAGAGTACTGGAGAGGGTATTATCAAAGCCTTCGCCCAACACAGATGGGGCTATCTCTGAATGTTGATGTCTCAGCCAGGGCATTCTACGAACCGATTCTGGTGCCTGATTTTCTTGTTAAACATTTTAAATTCAATTTTTCAAGGCCGCTGTCTGATCAAGATCGTGTCAAGATTAAGAAAGCATTGAGAGGAGTTAAGGTAGTGGTTATTGGAATTGGGAATACTAGAAGTTACAAAGTTGCTGGTGTCTCAAAAGAGCCCTTGCGGGAGCTGACATTTATCCTGGATGATAAAAAAACCAAAAAATCAGTTGTTCGATATTTTTATGAGAAATATGAAGTCGAGTTGAAGCATACAAATCTTCCTGCTGTCCAAGCTGGAAGTGACACAAAACCAGTCTACCTGCCAATGGAGCTTTGTCAGATTGTCTCTGGACAGAGGTACACCAAGAGATTAAATGAGGATCAAGTCACTGCTCTTTTAAGGGCCACTTGTCAGCGTCCTCATGAAAGGGAAAATTACATTAAACAGATTTTGAGGCAGAACAATTTCAACACAGACAAGCTTGTGCATGACTTCGGAATTCAAATAAAAGAAGAACTAGCGACGGTCGAAGCCCGTGTCTTGCCTCCCCCAACGCTTGTATATCACCAAACAGGGAAAGAATCAAGTGTTGACCCCTGGATGGGGCAATGGAATATGATAAACAAGAAAATGATTGATGGTGGGAAGGTGCGATATTGGGGTTGTGTCAACTTTTCAACAAGAGTTAACAGAGACTTGCCTTCAACTTTTTGTTTTGAGCTAGTCAATATGTGTACTAGCAAAGGAATGGTTTTTGCTCCAGAGCCTTTTGTACCCATCATTTCTGCTCAGCCTTCTCAAATAGAGAGAGTTCTCGTGGATGTGCATAAGCAGTCCGTGAATAAGCTTGCAACCATGAAGCTGGAGGGAAAACTTCAGCTGTTGATAATACTTCTGCCTGATGTCAAGGGGTCCTATGGAAGAATAAAGCGTATTTGCGAAACTGAATTAGGAATAGTCTCTCAGTGCTGTCAGCCTAGGCAAGCTTCAAAATTGAGTAAACAATACCTTGAAAATGTTTCCCTCAAGATAAATGTCAAGGCTGGAGGTCGAAATACAGTTTTGAATGATGCAATTCAGAGAACGATTCCTCATGTGAGCGATCTACCAACGTTAATCTTGGGTGCAGATGTGACACATCCACAACCAGGAGAAGATTCCAGCCCTTCGATAGCTGCGGTTGTGGGATCCATGGATTGGCCTTGGGTCACAAGATACAGGGGAATTGTTTCTGCTCAATCTCACCGAGAAGAAATTATTCAGGATCTTTATAATTCTTATCAGGATCCTAAGAGGGGATTGGTACATGGTGGAATGATCAGAGAGTTACTTAGAGCTTTCTATCAATCAGCCAGGGTTAAGCCTGCCAGGATTATATTCTACAGAGATGGTGTTAGTGAGGGTCAATTCAGTCAAGTTTTGCTTCACGAAATGGATGCAATTAGAAAGGCTTGTGTCTCATTAGAAGAGGGATATCTACCCCGGGTTACCTTTGTGGTGGTACAGAAGAGACATCACACTCGCTTTTTTCCTGTTGATCGTTCTCAGACAGATAAAAGTGGAAACATTATGCCAGGGACTGTAGTGGACACCTCAATCTGTCACCCTAGAGAGCATGATTTTTACCTTAATAGTCATGCCGGGATTCAAGGAACAAGTCGACCTACACATTATCATGTTTTGTATGATGAAAACAATTTCACTGCTGATGAGCTGCAAAGTCTGACTAATAACTTATGTTATACGTATGCAAGGTGCACTCGATCTGTATCAATAGTCCCTCCTGCTTATTATGCACACCTGGCTGCTTTCCGAGCTCGCTATTATATCGAAGGGGAAGCATCAGAAATAGGTTCGACAAGTGGTGGAAGTGGAAGCAGGGGCACTAATGTGGTGGTGACTATGCCCTCAGTCATGGAGAATGTGAAAGAAGTTATGTTTTTCTGCTGA 3000 0.4523 MSRRGGGSYQPDQRRDRPSPAQPTPAETSGRGRGRGRGGGRGVSGQGRGATHVPSPVIGSSSPAPVFGSQPTAPVIGSSLQAHVVSSASSSVAPPPAAAPTTAPTSVEAMSSEVAERLTLQPPAPSSSKAVRFPNRPGYGTRGKKIRIRANHFLVQVADRDLHHYDVEINPEVTSKKVNRDIMKQLVETYQETHLGKRTPAYDGRKNLYTGGALPFSSKEFVVKLVDQDQQPHSSEGSASKKREREFKVTIRFASKPDLHHLQQFLRRQQLDSPQETIQALDVVLRATPSLKYNVVGSSFFSPDLGISGSRGSGVGPLGSGTEYWRGYYQSLRPTQMGLSLNVDVSARAFYEPILVPDFLVKHFKFNFSRPLSDQDRVKIKKALRGVKVVVIGIGNTRSYKVAGVSKEPLRELTFILDDKKTKKSVVRYFYEKYEVELKHTNLPAVQAGSDTKPVYLPMELCQIVSGQRYTKRLNEDQVTALLRATCQRPHERENYIKQILRQNNFNTDKLVHDFGIQIKEELATVEARVLPPPTLVYHQTGKESSVDPWMGQWNMINKKMIDGGKVRYWGCVNFSTRVNRDLPSTFCFELVNMCTSKGMVFAPEPFVPIISAQPSQIERVLVDVHKQSVNKLATMKLEGKLQLLIILLPDVKGSYGRIKRICETELGIVSQCCQPRQASKLSKQYLENVSLKINVKAGGRNTVLNDAIQRTIPHVSDLPTLILGADVTHPQPGEDSSPSIAAVVGSMDWPWVTRYRGIVSAQSHREEIIQDLYNSYQDPKRGLVHGGMIRELLRAFYQSARVKPARIIFYRDGVSEGQFSQVLLHEMDAIRKACVSLEEGYLPRVTFVVVQKRHHTRFFPVDRSQTDKSGNIMPGTVVDTSICHPREHDFYLNSHAGIQGTSRPTHYHVLYDENNFTADELQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGEASEIGSTSGGSGSRGTNVVVTMPSVMENVKEVMFFC* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0337 999 Pfam Mid domain of argonaute 549 627 IPR032473 -
Lan7g0337 999 MobiDBLite consensus disorder prediction 55 73 - -
Lan7g0337 999 SMART PAZ_2_a_3 358 482 IPR003100 GO:0005515
Lan7g0337 999 Pfam N-terminal domain of argonaute 144 285 IPR032474 -
Lan7g0337 999 Gene3D paz domain 348 470 - -
Lan7g0337 999 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 72 979 - -
Lan7g0337 999 ProSiteProfiles PAZ domain profile. 370 466 IPR003100 GO:0005515
Lan7g0337 999 Gene3D - 713 999 IPR036397 GO:0003676
Lan7g0337 999 SMART Piwi_a_2 644 961 IPR003165 GO:0003676
Lan7g0337 999 ProSiteProfiles Piwi domain profile. 644 961 IPR003165 GO:0003676
Lan7g0337 999 PANTHER PROTEIN ARGONAUTE 1A 72 979 - -
Lan7g0337 999 Pfam Piwi domain 646 960 IPR003165 GO:0003676
Lan7g0337 999 Pfam Argonaute linker 1 domain 296 352 IPR014811 -
Lan7g0337 999 MobiDBLite consensus disorder prediction 1 73 - -
Lan7g0337 999 SMART DUF1785_2 294 353 IPR014811 -
Lan7g0337 999 CDD Piwi_ago-like 512 960 IPR045246 -
Lan7g0337 999 MobiDBLite consensus disorder prediction 90 138 - -
Lan7g0337 999 SUPERFAMILY PAZ domain 349 507 IPR036085 GO:0005515
Lan7g0337 999 CDD PAZ_argonaute_like 356 465 - -
Lan7g0337 999 Pfam PAZ domain 379 482 IPR003100 GO:0005515
Lan7g0337 999 Pfam Argonaute linker 2 domain 492 538 IPR032472 -
Lan7g0337 999 SUPERFAMILY Ribonuclease H-like 639 961 IPR012337 -
Lan7g0337 999 Gene3D - 530 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0337 Lan-Chr7 2303241 2309110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0337 90 999 Eukaryotic Initiation Factors Gene Family AT1G48410 58.324 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0337 K11593 - gmx:100799033 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0337 7 2303241 2309110 Lan7g0337 7 2303241 2309110 ECH
Lan7g0337 7 2303241 2309110 Lan8g1629 8 23248498 23254376 LSH