Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0332 ATGGCTATTGCTGGTCTGCATAATGTCTCCGTACGCGACTCTTCTTTTCTCAGGGAATCCCTTTCTCAGTCATCTCGGAGGCGCGGAGATGGAAGAAGAGGAAGCACTCAATCATCATTGTTGCAAATATGGCGAGAGATTGAGGATGAGCATGTGGCGAGTCAAGTTCATGGCAGGCCTGGTGAAGTATTAATTGAACAAAGGAGTGATGGGTTGATTGTTGACCTCTCACATGCGGATACGCCGCGTAGCCGTGAGAGAGGACGGGGAAATATGCTAGAAGAGGCAGTTTTGGCAGATAATGACTCTGAAATGTGGTCACAGTCACAAAGTCAGAATGAATCGCATGATGATCACGAGGATTTAAACAACTCTAGCTGTGAAAACTCTTCTGATTTGGGAGAAGTTGAAAGAGAAAGAGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCTAGGGAGTATGGGTCGAACATTTCCCGAAGAAATAGCAGTCCGATGGGAGAATGGCTTGGTGAAACAGAGCAGGAAAGGGTGAGAATCATAAGGGAGTGGGTACAACTGAGTAGCCAGCAGAGAGGTGTTTCTTCTGTGGAAAATAGGAAAGAACAATTTGCTGAAATTGATACTCAAATTGAACGTGTTCGGGATGGATTTATTCTTAACCAGAGTGAGCATACACGGAGAGGCATTCGTAAATTGTGTGGTCGACAGGTTATGCTTGATATGCTTAAGAAGGCTGAGAGGGAAAGGCAAAGAGAAATTCAGGAGTTATTGGACCATCGGGCTGTATCTCATTTCCCCCACCGTAATCGTATACAGGCATTGCTTAGAGGAAGGTTCTTGAGAAATGATAGATGCGGTGATAATAACATGCCCACTTCCACTGCACGAAGTGAATTAGGCTTATTGAGGCAAAGACAAACTGTATCAGGCCTTAGGGAGGGATTCTTCTCTAGAAAGGATGATACTGGTTGCAATCAAGCAACCAGCAACCTATCTGATACCGCATCTATCAGTGATATTGATTTTAATTCTAGTGAGCAAACAGGAGACAACAGTTCACAGCTGGTCCCACCTATACATTCTGAACCTAATAACAGAGGAAGTGATGGACTTCACATATCAGCTGACCGAAATTATTTACATGGAGTCACATTTGAAAATGTAGATACACAAGACTCTACTCTTCATGTAGAAGATCAGTTGCAGTCTATGCAAATTGAATCACTACATTCCCAACCATCACCAAGTGTTGATGTTAAAGGAAGAGGCAGCACCGAGCAAAATGTTGATATTGCGCTAACTGAAGATAGTGCTGACGAACTCACGCAAGAAAGTTTGCGAATTGGAAACTCGGAGAATAGTAATCTGCAGAAATTTAGTGAGGCTTATAATGAACAATCTGAGTTGGGTGATATACACAATGGTGAAAACAATCATATGGAGGACAACGTTGTTGATGATATGAATTGGAGTGAATCCAATGCACTGCAGGGAGATGAACTGGAAGAAGTTATTGACAGTGAAGGAAGTGACTGGCATCAGAGTAATACCGAAGGGAGAAATAGCTCTGAGCTGGGGGATATACGTAATGGTGAAAACAATCATATGGAGGGCAACGTTGTTGATGATATGAATTGGAGTGAATCCAATGCACTGCAGGGAGACCAGCTGGAAGAAGTTATTGATAGTGAAGGAAGTGACTGGCATCAGAGTAATACCGAAGGGAGAAATAGCACTGAGGAAAACGTGGATGATAATCATATTAGTAGTACAGCAAACGAATGGCCTGAAAACCGTTTGGGATATGAGGATGGAGATAATACTCGTCTGCAAGTAGCTCCTGAAGTGTGGCAAGAAGATAGTGGCTTCCAAGAGGCCATGGAAAACTGGTTTGGAGGGCCTTCTGGTCATGAAGACACTCCCGTTGGTAGAATTCCTGGTTTTTATTTCCCTGATGATGACAATGTGTACAGTGTTGAACTTAGGGAACTGCTTAGTAGGAGAAGTGTTTCTAACCTTCTTCATAGCAGCTTCCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAGGAGGTAATGCTCACATTGAGTGGGAGTTGCAAGAAACAACCCCGTCTTCTGCCTCAGTAGAACAGGACCTTGAGCAGCAGAGTAGGGATCAGATTGTTGGTGAGGAGGGTACTGTTAATAGTCCTCATGGCCTACCCGCTTTACCAATACCTCCTCCTTTGCCTCTTTGGGGTCGGCGTCCTCATCGTGACAACTGGTCACAAAATGACGTAAATAATCAGCGTCCAGGAATGGATTGGGAGGTTAATGACTTGAGACTTGACATGGCTAGACTACATCAAAGGATGAATTCTATGCAGAGAATGCTGGAGGCCTGTATGGATTTGCAGGTTGAGTTGCAGCGCTCAATCCGACAAGAAGTTTCTGCAGCTCTAAATCGATCAGCTGACTCATCAGGAACAAATGTCTGTGAACCATCATATGATGAATCTAAATGGGAATGTGTGAGAAAAGGGATTTGCTGTATATGCTGCGAAAGCAGTATTGATTCATTGTTGTACAGATGTGGACACTTGTGCACATGTTTAAAATGTGCTAACGAGTTGCTCCAAAGTCGAAGGAAATGCCCAATGTGTCAAGCACCTGTGGTGGAGGTGATACGTGCATATTCTATGCTATAA 2709 0.4363 MAIAGLHNVSVRDSSFLRESLSQSSRRRGDGRRGSTQSSLLQIWREIEDEHVASQVHGRPGEVLIEQRSDGLIVDLSHADTPRSRERGRGNMLEEAVLADNDSEMWSQSQSQNESHDDHEDLNNSSCENSSDLGEVERERVRQIFREWMNSGAREYGSNISRRNSSPMGEWLGETEQERVRIIREWVQLSSQQRGVSSVENRKEQFAEIDTQIERVRDGFILNQSEHTRRGIRKLCGRQVMLDMLKKAERERQREIQELLDHRAVSHFPHRNRIQALLRGRFLRNDRCGDNNMPTSTARSELGLLRQRQTVSGLREGFFSRKDDTGCNQATSNLSDTASISDIDFNSSEQTGDNSSQLVPPIHSEPNNRGSDGLHISADRNYLHGVTFENVDTQDSTLHVEDQLQSMQIESLHSQPSPSVDVKGRGSTEQNVDIALTEDSADELTQESLRIGNSENSNLQKFSEAYNEQSELGDIHNGENNHMEDNVVDDMNWSESNALQGDELEEVIDSEGSDWHQSNTEGRNSSELGDIRNGENNHMEGNVVDDMNWSESNALQGDQLEEVIDSEGSDWHQSNTEGRNSTEENVDDNHISSTANEWPENRLGYEDGDNTRLQVAPEVWQEDSGFQEAMENWFGGPSGHEDTPVGRIPGFYFPDDDNVYSVELRELLSRRSVSNLLHSSFRESLDQLIQSYVERQGGNAHIEWELQETTPSSASVEQDLEQQSRDQIVGEEGTVNSPHGLPALPIPPPLPLWGRRPHRDNWSQNDVNNQRPGMDWEVNDLRLDMARLHQRMNSMQRMLEACMDLQVELQRSIRQEVSAALNRSADSSGTNVCEPSYDESKWECVRKGICCICCESSIDSLLYRCGHLCTCLKCANELLQSRRKCPMCQAPVVEVIRAYSML* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0332 902 Pfam Zinc finger, C3HC4 type (RING finger) 848 894 - -
Lan7g0332 902 ProSiteProfiles Zinc finger RING-type profile. 850 889 IPR001841 -
Lan7g0332 902 CDD mRING-HC-C3HC5_NEU1 850 888 - -
Lan7g0332 902 Coils Coil 238 265 - -
Lan7g0332 902 MobiDBLite consensus disorder prediction 511 543 - -
Lan7g0332 902 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 836 900 IPR013083 -
Lan7g0332 902 PANTHER PROTEIN, PUTATIVE-RELATED 1 901 - -
Lan7g0332 902 MobiDBLite consensus disorder prediction 513 532 - -
Lan7g0332 902 MobiDBLite consensus disorder prediction 17 37 - -
Lan7g0332 902 SUPERFAMILY RING/U-box 849 895 - -
Lan7g0332 902 MobiDBLite consensus disorder prediction 100 135 - -
Lan7g0332 902 MobiDBLite consensus disorder prediction 325 376 - -
Lan7g0332 902 Coils Coil 778 798 - -
Lan7g0332 902 MobiDBLite consensus disorder prediction 325 364 - -
Lan7g0332 902 MobiDBLite consensus disorder prediction 567 608 - -
Lan7g0332 902 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0332 Lan-Chr7 2251451 2255911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0332 850 896 C3H Transcription Factor Family AT3G06140 40.426 5.56e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0332 - - lang:109351692 1756.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0332 7 2251451 2255911 Lan7g0332 7 2251451 2255911 ECH
Lan7g0332 7 2251451 2255911 Lan8g1633 8 23311401 23316980 LSH
Lan6g1910 6 30082213 30087443 Lan7g0332 7 2251451 2255911 PCT
Lan7g0332 7 2251451 2255911 Lan6g1910 6 30082213 30087443 PCT