Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0330 ATGGGTCAGATCCAGTACTCTGAAAAATACTTTGATGATACTTATGAGTACAGGCACGTAGTTCTGCCTCCTGATGTTGCAAAACTGCTTCCCAAGAATCGCCTTCTCTCTGAAAATGAGTGGCGTGCAATTGGGGTTCAGCAGAGCCGTGGATGGGTTCATTATGCAGTTCATAGGCCAGAGCCACATATAATGCTTTTCAGGAGGCCTTTGAATTATCAGCAGCAGCAAGAAACTCAGGCGCAGCTTGTCAAATGA 258 0.4574 MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRPEPHIMLFRRPLNYQQQQETQAQLVK* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0330 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 82 - -
Lan7g0330 85 Gene3D - 1 83 IPR036858 GO:0016538
Lan7g0330 85 SMART CKS_2 3 72 IPR000789 GO:0016538
Lan7g0330 85 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Lan7g0330 85 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Lan7g0330 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 82 - -
Lan7g0330 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Lan7g0330 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Lan7g0330 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Lan7g0330 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Lan7g0330 85 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0330 Lan-Chr7 2217587 2218822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0330 1 85 Core Cell Cycle Gene Families AT2G27960 94.253 4.74e-57 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0330 K02219 - csin:114267303 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0330 7 2217587 2218822 Lan8g1634 8 23334041 23335394 LSH
Lan7g0330 7 2217587 2218822 Lan13g0410 13 2818971 2820232 LSH