Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0326 ATGGAGAAGGATCAAGTATTGGGCAGTGAGGAAGAATTGGTGATCATGGCAAAGGGAAAACGCACCAAACGGCTAAGACTTTTGTCTCCTAATTTTGGTGGTAGTGGTGCCACTGCCACATGCACTTACACGAGTGCTAATAATTCTGAGGATAGTTCCTCAACTACTACTTATGAGAGCAATGATGAAGAAGATCAAGACATGGCTAATTGCTTGATCCTTCTCGCTCGAGGTGGTGGTGTAGGAGATTCTCATCATCATCAGAAACAACAAGACCACCATGATGGTGATGGTAATAACAAGATAGAAAAGGGTAGCAATAGTAATGGTACCCTAAAATTTGCTGAGATGGCTACAGCTATTTATGAGTGCAGAACTTGTAACCGAACCTTCCCTTCCTTTCAAGCCTTGGGTGGCCACAGGGCTAGTCATAAAAAGCTCAAACTCATGATGTCAGAAGAAAAGAGACTCTCTACACCGCAATCAGAACCGCAACCACATGTCGTATCCAAATTTGATCATTTTGAAGGAGGAGGCAAACCGCACATCAAAACTAGCCCTTCGATCTCCTTTAAATTGGAAAGTCAGGCCAATAGATCAATTTTCAATGCTAACAAGGCCAAGATTCATGAGTGTTCCATATGTGGGGCAGAATTTGCATCAGGACAAGCATTGGGTGGACACATGAGGAGGCATAGAGCCACCACAAACACTGCCACTCAGGTTCTTGCAGCAGCGAAAGAGGAAATTCAGCACCGGAGGAATATGTTAGAATTGGATCTTAACCTTCCGGCACCGGAGGAGGACCTCCGGGAGTCCAAGTATCAGTTTCCGGCAGTCCAAAAATCTATGGTGCTGTCTGCTTCTCCTGCTTTGGTGGATTGCCATTATTAG 894 0.4485 MEKDQVLGSEEELVIMAKGKRTKRLRLLSPNFGGSGATATCTYTSANNSEDSSSTTTYESNDEEDQDMANCLILLARGGGVGDSHHHQKQQDHHDGDGNNKIEKGSNSNGTLKFAEMATAIYECRTCNRTFPSFQALGGHRASHKKLKLMMSEEKRLSTPQSEPQPHVVSKFDHFEGGGKPHIKTSPSISFKLESQANRSIFNANKAKIHECSICGAEFASGQALGGHMRRHRATTNTATQVLAAAKEEIQHRRNMLELDLNLPAPEEDLRESKYQFPAVQKSMVLSASPALVDCHY* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0326 297 Pfam C2H2-type zinc finger 210 234 - -
Lan7g0326 297 Pfam C2H2-type zinc finger 122 146 - -
Lan7g0326 297 MobiDBLite consensus disorder prediction 43 63 - -
Lan7g0326 297 MobiDBLite consensus disorder prediction 79 109 - -
Lan7g0326 297 SUPERFAMILY beta-beta-alpha zinc fingers 121 232 IPR036236 -
Lan7g0326 297 SMART c2h2final6 122 144 IPR013087 -
Lan7g0326 297 SMART c2h2final6 210 232 IPR013087 -
Lan7g0326 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 210 237 IPR013087 -
Lan7g0326 297 ProSitePatterns Zinc finger C2H2 type domain signature. 124 144 IPR013087 -
Lan7g0326 297 Gene3D Classic Zinc Finger 119 232 - -
Lan7g0326 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 122 149 IPR013087 -
Lan7g0326 297 ProSitePatterns Zinc finger C2H2 type domain signature. 212 232 IPR013087 -
Lan7g0326 297 PANTHER ZINC FINGER PROTEIN ZAT5 7 297 - -
Lan7g0326 297 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 297 - -
Lan7g0326 297 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0326 Lan-Chr7 2198645 2200458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0326 1 297 C2H2 Transcription Factor Family AT2G28200 42.724 3.34e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan7g0326 zf-C2H2_6 2.6e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0326 - - aprc:113858527 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0326 7 2198645 2200458 Lan7g0326 7 2198645 2200458 ECH
Lan7g0326 7 2198645 2200458 Lan4g1180 4 18895441 18897011 ECH
Lan5g1146 5 24766127 24767235 Lan7g0326 7 2198645 2200458 ECH
Lan7g0326 7 2198645 2200458 Lan8g1638 8 23349539 23350951 LSH
Lan7g0326 7 2198645 2200458 Lan13g0408 13 2806499 2807657 LSH
Lan6g1913 6 30108517 30109343 Lan7g0326 7 2198645 2200458 PCT
Lan3g0098 3 677907 679108 Lan7g0326 7 2198645 2200458 PCT
Lan7g0326 7 2198645 2200458 Lan6g1913 6 30108517 30109343 PCT
Lan7g0326 7 2198645 2200458 Lan3g0098 3 677907 679108 PCT