Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0309 ATGATATCTCTTTTAATATTACTTGGTTTGAAAAGGGGGACTTGTGCAATATGCCTGAACATAATGAAACCAGGGCAGGGCCATGCCATTTTCATTGCAGAATGTTCTCACTCTTTCCATTTCTACTGCATCACTTCTAATGTAAAACACGGGAACCAGAATTGCCCTGTCTGCAGAGCAAAATGGAAAGAAGTTCCTTTCCACAGTCCTGCTTATAATGTCCCCCATAACATGGCTCGAATCAACCCACTAACTCCTCGTGATGTTGACTGGACAACTCTCTTAAGAATTCCTTCTCAACAACTCGATGCAGGTCAGACGAGTTCATCACTTAATCATGCTCCTGAGCCAGCAATCTTTGATGATGACGAAGCCCTGGATCAACAAAATTCAAATACCCACAATAAAAATGAGGATGATCACGGTATAGTAAGCACATTGGAGATCAAAACATATCCTGAAGTTTCAGCTGTTCCAAAGTCAACCTCACATGTTAATTTTGCTGTATTAATCCATCTCAAAGCTCCTCCTTCAGGGAGACAACAAAATGGTGGTGGAAACAATACTGAACAACCTCCTTCAGATCAAAATTCACGTGCTTCAGTTGATCTAGTTACAGTTCTTGATGTAAGTGGTAGCATGGGAGGTACTAAGCTTGCACTGTTGAAGCGTGCTATGGGCTTTGTCATACAGAACCTGGGTCCATCAGACCGGCTGTCTGTCATTGCCTTCTCCTCCACAGCACGACGCATTTTCCCTCTTCGGCAGATGACTGATGCTGGACGACAGCAGGCATTACAAGCTGTCAATTCCTTGGTTGCCAATGGTGGTACAAACATTGCTGAAGGATTGAGGAAAGGCGCTAAGGTGTTTGTTGACCGCAGATGCAAGAACCCAGTTAGCAGCATCATATTACTATCTGATGGGCAGGATACATACACAGCCAGTAGCAGGCCAAATGTTGAAACAAATTACCAGTTACTTGTCCCGAACTCCATCCATCGCAATAATGGTACAGGCTTGTCAATACCTGTGCATGCATTTGGCTTTGGATCCGATCATGATGCTACTTCAATGCATTCAATCTCTGATATATCTGGTGGTACATTTTCTTTCATTGAAGCTGAGGATGTGATTCAGGATGCATTTGCACAATGTATTGGGGGGCTCTTGAGTGTGGTGGTGCAAGAATTGCAGGTCAAAGTTGAGTGTGTTCACCCTAGTCTGCAACTTGGTTCAGTAAAAGCAGGAAGTTACCACACAAGCTTGATGGCCAATGCTAGAATGGCTTCTATTAATGTAGGAGATCTTTATGCTGAAGAAGAAAGAGATTTTTTGGTGACAGTCAATGTTCCAGTTGATAGTTCAAGTGATGAGATGACGTTGTTGATTGTGAGAGGTCTTTACAGAGACCCTATAACAAGAGAAATGGTAGATTTGGAAGAAACTAGTGAAGTAAAGATTCAGAGACCCAACATAGGTAGAACAGAACTATTTGTGTCAATAGAGGTTGACAGACAGCGAAACAGGCTTCGTGCAGCAGAGGCAATGGCTGAGGCTAGAGTTGCAGCTGAACGTGGTGATTTATCTGCTGCAGTTTCTGTCCTGGAGAGTTGTCACAAGGCATTGTTTGAAACTGTTTCTGCCCAAGCTGGGGATCGGTTATGCATTGCTCTTTCTGCTGAATTGAAGGAGATGCAGGAGAGGATGGCGAGCCAACGTGTTTATGAGCAATCTGGAAGGGCTTATGTTCTGTCAGGATTGAGCTCACATTCATGGCAAAGGGCAACGGCTCGAGGCGATTCCACAGACAGCACAAGCCTTCTGCAATCGTACCAAACACCTTCCATGGTTGACATGGTGACGCGTTCTCAGACCATTATTTTAGGGACTCCACAACGTAGACGAATCCTCCGCCCTGCAAAATCATTCCCTGAGAGGCATGGAAGGGAACAATAA 1959 0.4426 MISLLILLGLKRGTCAICLNIMKPGQGHAIFIAECSHSFHFYCITSNVKHGNQNCPVCRAKWKEVPFHSPAYNVPHNMARINPLTPRDVDWTTLLRIPSQQLDAGQTSSSLNHAPEPAIFDDDEALDQQNSNTHNKNEDDHGIVSTLEIKTYPEVSAVPKSTSHVNFAVLIHLKAPPSGRQQNGGGNNTEQPPSDQNSRASVDLVTVLDVSGSMGGTKLALLKRAMGFVIQNLGPSDRLSVIAFSSTARRIFPLRQMTDAGRQQALQAVNSLVANGGTNIAEGLRKGAKVFVDRRCKNPVSSIILLSDGQDTYTASSRPNVETNYQLLVPNSIHRNNGTGLSIPVHAFGFGSDHDATSMHSISDISGGTFSFIEAEDVIQDAFAQCIGGLLSVVVQELQVKVECVHPSLQLGSVKAGSYHTSLMANARMASINVGDLYAEEERDFLVTVNVPVDSSSDEMTLLIVRGLYRDPITREMVDLEETSEVKIQRPNIGRTELFVSIEVDRQRNRLRAAEAMAEARVAAERGDLSAAVSVLESCHKALFETVSAQAGDRLCIALSAELKEMQERMASQRVYEQSGRAYVLSGLSSHSWQRATARGDSTDSTSLLQSYQTPSMVDMVTRSQTIILGTPQRRRILRPAKSFPERHGREQ* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0309 652 ProSiteProfiles Zinc finger RING-type profile. 15 59 IPR001841 -
Lan7g0309 652 SMART VWA_4 201 383 IPR002035 -
Lan7g0309 652 MobiDBLite consensus disorder prediction 180 199 - -
Lan7g0309 652 CDD vWA_C3HC4_type 202 374 - -
Lan7g0309 652 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 13 648 - -
Lan7g0309 652 PANTHER RETROELEMENT POL POLYPROTEIN-LIKE 13 648 - -
Lan7g0309 652 SUPERFAMILY RING/U-box 13 67 - -
Lan7g0309 652 SUPERFAMILY vWA-like 200 387 IPR036465 -
Lan7g0309 652 SMART ring_2 15 58 IPR001841 -
Lan7g0309 652 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 148 IPR013083 -
Lan7g0309 652 CDD RING-H2 15 59 - -
Lan7g0309 652 Pfam RING-like zinc finger 15 44 IPR001841 -
Lan7g0309 652 ProSiteProfiles VWFA domain profile. 203 387 IPR002035 -
Lan7g0309 652 Pfam VWA / Hh protein intein-like 553 626 IPR032838 -
Lan7g0309 652 Pfam von Willebrand factor type A domain 203 384 IPR002035 -
Lan7g0309 652 Gene3D von Willebrand factor, type A domain 203 388 IPR036465 -
Lan7g0309 652 MobiDBLite consensus disorder prediction 176 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0309 Lan-Chr7 2012055 2024391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0309 13 59 C3H Transcription Factor Family AT5G41440 42.553 2.35e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0309 - - gmx:100818406 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0309 7 2012055 2024391 Lan7g0309 7 2012055 2024391 ECH