Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0308 ATGAAGTTGGAGCTCAAATTTGTTTTTGCTTTTGCTATTAGCTTGCTCTGGATTCAGCACTCATTCTGTGATAAACCTTCTAATACATCTGTCCTAAGCCAATGGAAATGTAGATGCTCTTCCTTTCCAGAGAATGAAAGCTATTCTCTTGCTAATTGCTCTAAGTCATGTGATTGTCATTCAGAGGAGAGCACATCCATATGGACATGCATATGTGATCCCGATGGGTTACCCCAAGTGGCATCAGATGGTCATAGCTCTAAATGCTTTACTGCCTGCAACTGCACCTCGGTGTTCTCTGCAGGAACTGTCAGCGCGTCACTAGGTTCAAAGAAACACATTTCAGGCAGAACTGTTGTACTTATTCTATTAACATGTGTTTTGTGCATAACCATTGTGTTTTTGGCCTCGCTTATATTTTATGTCTACCGAAGAGACAGATGTTCTATTCAATCACCAATATTCTCACCAGATAAGGAGACAAGTGGTAGTACAACCAACTTAATTAGTCATAGGACAGAGGTTTCTTCAGTGCCAGAAACAAAATTCACTACAAATTCTCCTATTTGCCATATTACAGGATGCTTTCCGAAAGCCTCTTTTATATTTGGGAGCCAAAAAGAAACTTTTCATGGAAATATTATTCAATTTTCGTTTGATGAACTAGTGAATGCCACTGAAAGCTTTTCAGCCTCCAACCTAATTGGACTAGGTGGAAGTAGTTATGTATACCATGGTCGGCTGAAGGATGGTAGTGATGTCGCAGTTAAGCGACTAAAAGATCAAGGAGGGCTGGACGCAGACTCTAAATTTTTCAAAGAGATTGAATTATTCTCTAGACTTCATCATTGTCATTTGGTACCTTTGCTTGGATACTGCGCAGAATTAAAAGGAAGGGTTGTTCAGAGGTTACTAGTATTTCAGTACATAATTAATGGAAATTTGAGAGACTGTTTGGATGGAGTTTCTGGACAAAATTTGGATTGGTCTACTCGTGTTGCAATTGCAATAGGAGCTGCAAGGGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAAAATTCTTCACAGAGATGTCAAATCATCAAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCCAAAAGCTTGAGATCTGATGACCTCCCCAGCTGTTCAAATTCTCCAGCTAGAATGCAGGGAACATTTGGGTATTTCGCACCGGAGTATGCTATTGTTGGGAGAGCCTCTCTTGAGTCAGATGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGCTTATCAGTGGTCGCCATCCCATCCATAAATCTACGGGCAAAGAAGAAAGCCTTGTTATATGGGCGGTTCCACGTTTACGAGATAGTAGGCGAGTCATAACGGAGTTGGTTGATAAAAAATTGAACGGAAATTTCCAAGAAGAAGAGGTGCAAATAATGGCATACTTAGCAAAGGAGTGTTTGCTGTTGGATCCTGACACTCGACCAACCATGAGTGAGGTTGTTCAAGTTCTTTCTAGTATCTCCCCAGGCAAATCATGGAGTAGAAGAAAAATTTCAGCAAACCTGTTTCAGGAACATGATGATACAGAGAAGCAAAGGCAATGTCAGAGTTCATTGACATTGGATATTAATCACAAAAATAAAGAAGCAGTTGAACATGAAGAGAATTTTCTATTTTCTAAAACTGAATGCTGGCATGCATCAGAAGAGGAAATTGTAGACTTAACTGAGCCACGGTTTGAATCATTTTGCATGACAAATATCCACTCCCCTTGA 1788 0.4016 MKLELKFVFAFAISLLWIQHSFCDKPSNTSVLSQWKCRCSSFPENESYSLANCSKSCDCHSEESTSIWTCICDPDGLPQVASDGHSSKCFTACNCTSVFSAGTVSASLGSKKHISGRTVVLILLTCVLCITIVFLASLIFYVYRRDRCSIQSPIFSPDKETSGSTTNLISHRTEVSSVPETKFTTNSPICHITGCFPKASFIFGSQKETFHGNIIQFSFDELVNATESFSASNLIGLGGSSYVYHGRLKDGSDVAVKRLKDQGGLDADSKFFKEIELFSRLHHCHLVPLLGYCAELKGRVVQRLLVFQYIINGNLRDCLDGVSGQNLDWSTRVAIAIGAARGLEYLHEAAAPKILHRDVKSSNILLDENWQAKITDLGMAKSLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRHPIHKSTGKEESLVIWAVPRLRDSRRVITELVDKKLNGNFQEEEVQIMAYLAKECLLLDPDTRPTMSEVVQVLSSISPGKSWSRRKISANLFQEHDDTEKQRQCQSSLTLDINHKNKEAVEHEENFLFSKTECWHASEEEIVDLTEPRFESFCMTNIHSP* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0308 595 Pfam Protein kinase domain 231 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0308 595 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Lan7g0308 595 Gene3D Transferase(Phosphotransferase) domain 1 311 535 - -
Lan7g0308 595 Gene3D Phosphorylase Kinase; domain 1 203 309 - -
Lan7g0308 595 SUPERFAMILY Protein kinase-like (PK-like) 210 508 IPR011009 -
Lan7g0308 595 CDD STKc_IRAK 235 511 - -
Lan7g0308 595 PANTHER OS01G0253100 PROTEIN 2 589 IPR045271 GO:0004714|GO:0006468
Lan7g0308 595 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 589 - -
Lan7g0308 595 ProSiteProfiles Protein kinase domain profile. 229 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0308 595 SMART serkin_6 229 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0308 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0308 Lan-Chr7 2004568 2009883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0308 1 592 Receptor kinase-like Gene Family AT2G28250 51.003 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lan7g0308 Pkinase 7.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0308 - - lang:109351663 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0308 7 2004568 2009883 Lan7g0308 7 2004568 2009883 ECH
Lan7g0308 7 2004568 2009883 Lan8g1657 8 23546282 23552324 LSH
Lan6g1931 6 30282614 30286901 Lan7g0308 7 2004568 2009883 PCT
Lan7g0308 7 2004568 2009883 Lan6g1931 6 30282614 30286901 PCT