Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0302 ATGGCTATGGCTGTGGCTCATCATAGAGAGAATAGCAGCAACAACAACAACAGTGGTAGCATTGACAAGCACCTTGATTCAATTTCTGGGAAGTATGTAAGGTACACTTCTGAACAAGTTGAAGCTTTGGAAAGAGTTTATGCTGAGTGTCCCAAACCTAGCTCCCTAAGGAGGCAACAGTTAATCAGAGACTGCCCCATTCTTTCTAATATTGATCCAAAGCAAATCAAGGTTTGGTTCCAGAATAGAAGGTGTAGAGAGAAGCAAAGAAAAGAAGCTTCACGGCTTCAGACTGTGAACCGGAAGCTTTCAGCAATGAACAAGTTGTTGATGGAGGAGAATGACCGGTTGCAGAAACAGGTGTCACAGCTTGTGTGTGAGAATGGTTTTATGAGGCAGCAATTGCATACTACACCAGCAGCAACTGCAGATGCTAGTTCTGATTCAGTGGTTACCACTACTCAGCATTCTATGAGAGATGCTAATAACCCTGCTGGACTCCTATCAATTGCACAGGAGACCTTGACAAAGTTCCTTTCCAAGGCTACAGGAACGGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCTATTTCACAAAGTTGCGGTGGAGTGGCAGCTAGAGCCTGCGGTCTTGTTAGTTTAGAACCTATGAAGATTGTGGAGATCCTAAAAGATCGTCTATCTTGGTTTCGGGAATGTCGGAGCCTAGAAGTTTTCACAAGTTTCCCTGCTGGAAATGGAGGGACCATTGAACTTGTTTACACACAGACATATGCTCCAACAACTCTGGCTCCTTCCCGGGATTTCTGGACTCTGAGATACACTACAACTTTGGAAAATGGCAGTCTCGTGGTTTGCGAGAGGTCACTGTCTGGTACTGGCACTGGCCCTAATCCAGCTGCCGCTGCTCAGTTTGTGAGGGCTGAAATGCTCCCTAGTGGCTACTTGATTCGACCGTGTGAGGGTGCAGGGTCAATTATCCACATTGTGGACCACCTAAATCTTGAGGCACAGAGTGCACCAGAAGTGTTGCGACCACTCTATGAATCATCAAAAGTGATAGCTCAGAAAATGACAATTGCAGCACTTCGGTATATTAGGCAAATAGCTCAAGAAACAAGTGGCGAAGTGGTATATGGATTGGGTAGGCAGCCAGCTGTTCTGCGAACTTTCAGCCAAAGGTTAAGCAGAGGCTTCAATGATGCTGTAAATGGATTCAATGATGATGGATGGACTATAGTGAATTGTGATGGTGCTGAGGATGTAATTATTGCAGTTAATTCAGCCAAGAATTTGAATGGCATCTCAAATTCAGCAAGTTCCAGTGCATTCCTTGGAGGAGTTCTCTGTGCAAAAGCTTCTATGCTGCTCCAAAATGTCTCTCCTGCAGTTTTGATTCGCTTTCTGAGGGAGCATCGCTCAGAGTGGGCTGATTTTAATGTTGATGCTTATGCTGCCGCATCACTGAAAGCTGACACTTATGCGTATCCAGGAATGAGGCCTACTAGATTTACTGGCAATCAAATAATCATGCCCCTTGGCCATACCATTGAACATGAAGAGATGCTTGAAGTTATTCGACTTGAAGGCCACTCTCTTGCTGAAGAGGACACTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGAGTCGATGAGAATGCTATTGGGGCTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCTTGATGATGCTCCATTGGTGGCTTCTGGATTTCGCATTATTCCATTGGCTTCAAAACAAGGTGATAAAAAAGTTGAGACTCTGGATTTGACATCTGGTCTTGAAGTGGTCCCAATGACAGTTCATGGTGCAGATGCATCTAGTCAAAACACTCGATCAGTGTTGACTATCGCCTTCCAGTTTCCTTTCGACAGAAGTTTGCAAGATAATGTTGCTATCATGGCTCGCCAATATGTCCGGAGTGTAATTTCCTCTGTGCAGAGGGTTGCCATGGCTATATCTCCATCGGGTATAAGCCCGGGCGTTGGAGCAAAACTTTCTCATGGTTCTCCAGAAGCTCTAACACTAGCTCAGTGGATCTGTCTGAGTTATAGTTATCATTTGGGAACTGACTTACTTAGATCAGATTCTCTTGTTGGTGACTTGATGCCGAAACATCTTTGGCATCATCAGGATGCCATTTTGTGCTGTTCAGTGAAGCAGTTGCTGCCTTTGTTCATCTTTGCAAATCAAGCTGGACTTGACATGCTGGAAACAAGCCTCGTAGCTTTACAGGACATCACGCTCGATAAAATATTTGACGAGTCTGGACGCAAAACATTGTATGCAGGCTTTGCCAAGTTAATGGAGCAGGGGTTTGCTTATTTGCCAGCTGGGATCTGCATGTCGACGATGGGGCGGCATGTTTCATATGAGCAAGCAATAGCATGGAAAGTGCTTAATGCAGAAGATAACACTGTTCATTGCTTGGCTTTCTCTTTCATAAATTGGTCATTTGTATGA 2532 0.4467 MAMAVAHHRENSSNNNNSGSIDKHLDSISGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRDCPILSNIDPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTTPAATADASSDSVVTTTQHSMRDANNPAGLLSIAQETLTKFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPMKIVEILKDRLSWFRECRSLEVFTSFPAGNGGTIELVYTQTYAPTTLAPSRDFWTLRYTTTLENGSLVVCERSLSGTGTGPNPAAAAQFVRAEMLPSGYLIRPCEGAGSIIHIVDHLNLEAQSAPEVLRPLYESSKVIAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTIVNCDGAEDVIIAVNSAKNLNGISNSASSSAFLGGVLCAKASMLLQNVSPAVLIRFLREHRSEWADFNVDAYAAASLKADTYAYPGMRPTRFTGNQIIMPLGHTIEHEEMLEVIRLEGHSLAEEDTFVSRDIHLLQICSGVDENAIGACSELIFAPIDEMFLDDAPLVASGFRIIPLASKQGDKKVETLDLTSGLEVVPMTVHGADASSQNTRSVLTIAFQFPFDRSLQDNVAIMARQYVRSVISSVQRVAMAISPSGISPGVGAKLSHGSPEALTLAQWICLSYSYHLGTDLLRSDSLVGDLMPKHLWHHQDAILCCSVKQLLPLFIFANQAGLDMLETSLVALQDITLDKIFDESGRKTLYAGFAKLMEQGFAYLPAGICMSTMGRHVSYEQAIAWKVLNAEDNTVHCLAFSFINWSFV* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0302 843 SUPERFAMILY Bet v1-like 169 381 - -
Lan7g0302 843 Pfam Homeodomain 31 89 IPR001356 GO:0003677
Lan7g0302 843 CDD bZIP 83 122 - -
Lan7g0302 843 Pfam MEKHLA domain 698 842 IPR013978 -
Lan7g0302 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 843 - -
Lan7g0302 843 SMART START_1 169 379 IPR002913 GO:0008289
Lan7g0302 843 CDD homeodomain 31 91 IPR001356 GO:0003677
Lan7g0302 843 ProSiteProfiles START domain profile. 160 388 IPR002913 GO:0008289
Lan7g0302 843 Gene3D - 25 97 - -
Lan7g0302 843 MobiDBLite consensus disorder prediction 1 23 - -
Lan7g0302 843 MobiDBLite consensus disorder prediction 8 23 - -
Lan7g0302 843 Gene3D - 206 385 IPR023393 -
Lan7g0302 843 Pfam START domain 170 377 IPR002913 GO:0008289
Lan7g0302 843 CDD START_ArGLABRA2_like 164 380 - -
Lan7g0302 843 SMART HOX_1 28 94 IPR001356 GO:0003677
Lan7g0302 843 Coils Coil 96 127 - -
Lan7g0302 843 ProSiteProfiles 'Homeobox' domain profile. 26 90 IPR001356 GO:0003677
Lan7g0302 843 SUPERFAMILY Homeodomain-like 30 93 IPR009057 -
Lan7g0302 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 843 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0302 Lan-Chr7 1950330 1957474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0302 1 843 Homeobox Transcription Factor Family AT5G60690 78.596 0.0 1370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan7g0302 START 1.3e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0302 K09338 - gmx:100813804 1454.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0302 7 1950330 1957474 Lan7g0302 7 1950330 1957474 ECH
Lan7g0302 7 1950330 1957474 Lan8g1664 8 23606522 23613292 LSH