Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0287 ATGTGGGTTGTGTACTGTCTTGGTTTGTCCCCCACCCAACACACTCTATCTCTCAACAACAGTCCAACTTCAAAAGCCACTACCACATTGTCTTTTTTTGCCTTTTGTTTCTGTGCTTCCTATGCATTTGTCTATGTCTGTTCCCTCCTCTCACTACCTGCAAATGCTTGTGGAATCATTCTTCCTTCAAAGTTTTCAAATTTTTGCTGTTGGGTTGCTTGTGTTCTATCTTTCTTCCATTTGAGAATCAACTATAGTAGGTGTTCATTCATGGAAATTGATCTGAACCATGCAGTGACTGAGGTTGAGAAGAATGGATTCTGTAATGAAGAATGTGATGAGAAAGGTGCTTGTGTTTGTTATTTGTCCTCCTCTAATTCAACTTGTTCATCTTCTACTACCTCTTCACATCATGTATCTTCTTCTTACCTTGAGCTTTGGCATGCTTGTGCTGGCCCCCTTACTTCACTTCCAAAGAAAGGAAATGTGGTTGTCTATTTTCCACAAGGTCACTTAGAACAGGTTGCATCTTTCACACCAATGGAGATGCCCACTTATGATCTTCAGCCACAAATATTTTGCAGGGTTGTCAATGTCCAATTACTTGCTAATAAGGAGAATGATGAGGTTTATACCCAAGTTACTTTGCTTCCCCAGGCTGAGTTGGAAGGGATGCATTTGAAGGGAAAAGAGCTTGAGGAATTAGGATCAGATGAGGAAGGAATTGGAGGAACACCTAAAAGATTAACCCCTCACATGTTCTGCAAAACACTTACTGCCTCTGATACAAGCACTCATGGGGGATTCTCTGTTCCTCGTAGAGCCGCTGAAGACTGTTTTCCTCCTTTGGATTATAAGCAGGTGAGACCCTCTCAAGAACTTGTTGCCAAAGACCTGCATGGCGTAGAGTGGAAATTTCGTCATATTTATAGAGGTCAGCCAAGGCGGCATCTGCTCACTACCGGCTGGAGTATTTTTGTTAGCCGAAAGAATCTTGTTTCTGGCGATGCAGTACTCTTTCTACGGGGTGAAAATGGAGAATTGAGATTAGGAATCAGAAGATCAGTTCGACTAAGAAATGGTCTTCCAGAATCAGTTGTTGGTAACCAGAACTGTTATCCCAATTTCCTTTCATCTGTGGCTAATGCTATATCAACCAAAAGCATATTTCGCATTTTCTACAGTCCAAGGGCAAGTCACTCAGACTTTGTTGTACCCTACCGGAAATATGTTAAAAGTATCAAGAATCCAGTGACCACTGGGACAAGATTCAAAATGAGATTTGAAATGGATGAATCTAAAGAAAGACGGTGTAATAGTGGTATGGTGATTGGAACGAGTGATTTTGACCCTTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTCAGATGGGATGAGAATATTGAGACTAATCATCAAGATCATGTATCTCCATGGGAGATTGATCCTTCTGCATCTCTCCCTCCCTTGAGCATTCAGTCTTCCCCGAGACTGAAGAAACCACGGACAGGGTTGGCAGCAGGAGGCAGAGGATTAAATGACTTTGAGGAGTCTGTAAGATCACCCAAGGTCTTGCAAGGTCAAGAAAATTCAGGTTTTGTGTCACACTATTATGGACGTGACGCAGTAACCAACCGGTCAGATTTTGTGATGAACTCTCCAAGTCATCCAAATCTAGCATCAACTGGAGGAAGAAAGGGCGTCTCTGCCGAACTTATGAGTGTTCACCCTTTAAGTTATGCAGCCTTTGTGGAAACTAATAGGTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTCCAGTGAATTCCCTCACGGGAAAGTTTGATTACAAAGTTGGTGCTTGGGGCAATCCTGATGTCAGTTGCACAACTTTCAACTCGCATCGAGCAACCAAACACAACTTTCAATCTTTAGGACCACGAGTTCTTCAATCTCCATATTTTCAATATGGGGATATTAACAAAGATGGTAAAGCTAGCATATTTTGCTCTAAACCTACAAATCTGCAGAGAGAGTATAGTCCATATAACAGAACTTCAAGTCAGGCAAGGATCATGAGAAATGAAGTTGGATTATCAGATCTCTCAAGTGAGCATAAGCTGCATGATAGTATTTCTGTTGCTGCTTCATTAGAGGCATCAAATATGAGGATTCAAAATGAAAACAATGTCAAGGGGAAGGTAATTGGCTGCAAACTATTTGGATTTCCTTTGTCTGGTGAAACTACTACCCAAAATTTGCAGAACTCTGCTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGAAGCTTAGTTGGAAGAGCCATTGATCTCGCAAGATTGAGCTGCTACAATGATTTGCTGAGTGAACTAGAGAGACTATTTGGCATGGAAGGACTTCTAGGAGATCCTGATAAGGGATGGAGAATCCTGTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGACCCTTGGCATGAGTTTTGCAATGTGGCGTCCAAGATCCATATATATACCCACGAAGAGGTGGAGAATATGACACTTGGGATGACAAGTGATGATACTAATAGCTGTTTAGATCAGGCACCAGTGATCATGGAGGCATCAAAGTCTTCCTCAGTGGGTCAGCCAGATTCTCCAACAGTAGTTAGAGTCTAA 2649 0.4198 MWVVYCLGLSPTQHTLSLNNSPTSKATTTLSFFAFCFCASYAFVYVCSLLSLPANACGIILPSKFSNFCCWVACVLSFFHLRINYSRCSFMEIDLNHAVTEVEKNGFCNEECDEKGACVCYLSSSNSTCSSSTTSSHHVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASFTPMEMPTYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELEGMHLKGKELEELGSDEEGIGGTPKRLTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQVRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSRKNLVSGDAVLFLRGENGELRLGIRRSVRLRNGLPESVVGNQNCYPNFLSSVANAISTKSIFRIFYSPRASHSDFVVPYRKYVKSIKNPVTTGTRFKMRFEMDESKERRCNSGMVIGTSDFDPYRWPKSKWRCLMVRWDENIETNHQDHVSPWEIDPSASLPPLSIQSSPRLKKPRTGLAAGGRGLNDFEESVRSPKVLQGQENSGFVSHYYGRDAVTNRSDFVMNSPSHPNLASTGGRKGVSAELMSVHPLSYAAFVETNRFPRVLQGQEICPVNSLTGKFDYKVGAWGNPDVSCTTFNSHRATKHNFQSLGPRVLQSPYFQYGDINKDGKASIFCSKPTNLQREYSPYNRTSSQARIMRNEVGLSDLSSEHKLHDSISVAASLEASNMRIQNENNVKGKVIGCKLFGFPLSGETTTQNLQNSAKRSCTKVHKQGSLVGRAIDLARLSCYNDLLSELERLFGMEGLLGDPDKGWRILYTDSENDIMVVGDDPWHEFCNVASKIHIYTHEEVENMTLGMTSDDTNSCLDQAPVIMEASKSSSVGQPDSPTVVRV* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0287 882 SUPERFAMILY DNA-binding pseudobarrel domain 250 366 IPR015300 -
Lan7g0287 882 ProSiteProfiles PB1 domain profile. 755 839 IPR000270 GO:0005515
Lan7g0287 882 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 112 870 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan7g0287 882 MobiDBLite consensus disorder prediction 492 515 - -
Lan7g0287 882 Pfam Auxin response factor 380 462 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan7g0287 882 ProSiteProfiles B3 DNA-binding domain profile. 254 356 IPR003340 GO:0003677
Lan7g0287 882 SUPERFAMILY CAD & PB1 domains 758 834 - -
Lan7g0287 882 Gene3D - 252 356 IPR015300 -
Lan7g0287 882 CDD B3_DNA 252 354 IPR003340 GO:0003677
Lan7g0287 882 Pfam B3 DNA binding domain 254 355 IPR003340 GO:0003677
Lan7g0287 882 Gene3D - 751 844 - -
Lan7g0287 882 PANTHER AUXIN RESPONSE FACTOR 112 870 - -
Lan7g0287 882 SMART B3_2 254 356 IPR003340 GO:0003677
Lan7g0287 882 Gene3D - 418 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0287 Lan-Chr7 1846094 1851299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0287 139 882 B3 DNA Binding Superfamily AT5G60450 57.950 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan7g0287 AUX_IAA 9.6e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0287 - - lang:109351638 1771.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0287 7 1846094 1851299 Lan7g0287 7 1846094 1851299 ECH
Lan7g0287 7 1846094 1851299 Lan13g0372 13 2483172 2488472 LSH