Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0285 ATGGATTTGATACCAAGTTGCAAGGAAAAATTGGCATATTTCCGTGTAAAAGAGCTCAAAGATGTGCTCACTCAATTAGGACTTTCAAAGCAGGGAAAGAAGCAGGATCTTGTTGATCGGATATTGGTCAGTATCACAGATGAACAAGTTTCAAAAATGTGGGCTAAGAAGAATGCTGTCTCAAAAGAACAGGTGGCAAAATTAGTGGATGACACATATAGAAAAATGCAGATATCTGGTGGGGCTACTGATCTAGCATCAAAGGGACATGGTGCCTCTGATAGTAGTACTGTAAAAATTAAAGGGGAAATTGAAGATTCCTTTCAATCAGATACAAAAATTCGCTGTCTCTGTGGAAGTACATTGGAAACAGAGCCACTAGTCAAGTGTGATGGTCCAAGATGCCATGTGTGGCAGCACATTAGTTGTGTTATTATTCCGGAGAAACCTGTAGATGGCATCCCACCAGTTCCTGATCAATTTTATTGTGAACTCTGTCGACTCAGCCGTGCAGACCCGTTTTGGGTTACAGTAGTGCACCCTTTGTTTCCTGTGAAGTTGACCCCAACTAGTATTCCAACTGATGGAACCAACCCAGTGCAGAGTGTGGATAGAACCTTTCAACTTACAAGAGCAGACAAGGACTTGGTATCAAAACAGGAATTTGATGTTCAGGCTTGGTGTATGCTTCTGAACGACAAGGTTTCATTTAGGATGCAATGGCCACAGTATACAGACTTGCAGGTCAATGGTGTTCCTGTCCGTGCTATTAACAGACCTGGTTCACAATTGCTTGGGGCAAATGGTCGTGATGATGGTCCAATTATCACGCCATATATAAAAGATGGAATCAATAAGATTCACTTAACTGGGTGTGATGCTCGTGTTTTTTGTTTTGGGATCCGTATTGTTAAAAGACGCAGCATGCAGCAGGTCCTAAACATTATTCCCAAGGAGCCTGACGGTGAGCGTTTTGAAGATGCCCTTGCACGTGTCTGTCGATGCGTTGGAGGTGGAAATGCAGATGACAATGCTGATAGTGACAGTGATTTGGAAGTGGTTTCAGATACTTTTACCATCAACCTTCGTTGTCCAATGAGCGGTTCAAGAATGAAGATCGCAGGAAGGTTCAAACCTTGTGTTCACATGGGCTGTTTTGATCTTGAAGTTTTTGTGGAAATGAATCAACGGTCAAGGAAGTGGCAATGCCCCATATGTCTAAAAAACTATGCTTTGGAGAATATCATCATTGATCCTTATTTTAATCGAATCACTTCTAAGATGATACATTGTGGTGAAGAGGTTACAGAGGTTGAGGTGAAGCCTGATAGCTCTTGGCGTGTGAAGACAAAGAGTGAAAGTGAACGCCTAGAGATAGGGAATCTTGCACAATGGCACTCTCCTGATGGATCCCTCTGTATTTCCAATGATAGAGAAAAAAAATTGGAAACATTGAAGCAGGTAAAACAAGAAGGTGTTTCAGGCTCTCCTACTGGTTTAAAAATTGGCATAAGGAAGAATCGCAATGGAGTTTGGGAAGTCAGCAAACCTGAGGACACTAACACTTCTTCTGGCAATAGATTGAAAGGGGTCTTTGGAAATCATGAACAAGTTGTTATTCCAATGAGCAGCAGTGCCACTGGAAGTGGTCGGGATGGTGATGATCCTAGCGTAAATCAGGGTGGTGGTGGGCATATTGATTATTCTACTACCAATGGGCTTGAGTTGGATTCTCTGTGTCTCAATAATGCTGCTTTGACATATGGATATACTGCGCATAATATTTCTGCTCAAGCGGTTGCTGCTGAAGTTATTATTCTGAGTGATTCGGATGAAGACAATGACGTGCTGATATCTCCCACAATTGCATATAAGAACAACCAAACTTGTGCTACAGGAGATAGTTACTCGGTGCCACCACCTGGAATTGTTGATTCGTACACTGAAGATCACAGTCTTGGTGGAAATTCATGCCTGGGACTTTTTCCTAACGAAGATGATTTTGTGATGCATTCCTCTCTGTGGTCATTGCCGTCCGGAACACAGGCTGATCCTGAATTCCAATTCTTTGGTTCTAATGCAGATGTATCAGATGCTTTGGTCCATTTGCAGCATGGTCCTATTAATTGCTCTTCATCATTGAATGGCTATTCATTGGCTCCGGATACTGCTCTGGGATCTAGTACTCTCATACCAGATTCCTCTGCTTGTCGGTCTGATGCTGATTTAAATGGTGGTTTGGTTGACAATCCATTGGCATTTGCTGGAGATGATCCCTCACTTCAGATTTTTCTCCCCACCAGACCAGCAGAATCATCAGTTCAGCATGGATCAAGAGATCAGACAAATGTGACTAATGGTATCTGCACTGAGGATTGGATATCTCTTAGTCTTGGAGGTGGTGCTTCTGGCAGTAATGGCAATGCTTCCACTCAAAATGGATTTAATTCTGGCCTTCAAGTCCCAACCAGAGGAGCTGCCACAAATAATATGGCTGATACTGCAGCTTCTTTGCTTCTTGGAATGAATGATGATAGATCCGACAAGACAAGTAGACCAAGATCAGATAACCCTTTCTCATTTCCTCGCCAAAAACGTTCCGTGAGACCCCGCTTGTATCTTTCCATTGATTCAGAATCAGAGTAA 2646 0.4263 MDLIPSCKEKLAYFRVKELKDVLTQLGLSKQGKKQDLVDRILVSITDEQVSKMWAKKNAVSKEQVAKLVDDTYRKMQISGGATDLASKGHGASDSSTVKIKGEIEDSFQSDTKIRCLCGSTLETEPLVKCDGPRCHVWQHISCVIIPEKPVDGIPPVPDQFYCELCRLSRADPFWVTVVHPLFPVKLTPTSIPTDGTNPVQSVDRTFQLTRADKDLVSKQEFDVQAWCMLLNDKVSFRMQWPQYTDLQVNGVPVRAINRPGSQLLGANGRDDGPIITPYIKDGINKIHLTGCDARVFCFGIRIVKRRSMQQVLNIIPKEPDGERFEDALARVCRCVGGGNADDNADSDSDLEVVSDTFTINLRCPMSGSRMKIAGRFKPCVHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSKMIHCGEEVTEVEVKPDSSWRVKTKSESERLEIGNLAQWHSPDGSLCISNDREKKLETLKQVKQEGVSGSPTGLKIGIRKNRNGVWEVSKPEDTNTSSGNRLKGVFGNHEQVVIPMSSSATGSGRDGDDPSVNQGGGGHIDYSTTNGLELDSLCLNNAALTYGYTAHNISAQAVAAEVIILSDSDEDNDVLISPTIAYKNNQTCATGDSYSVPPPGIVDSYTEDHSLGGNSCLGLFPNEDDFVMHSSLWSLPSGTQADPEFQFFGSNADVSDALVHLQHGPINCSSSLNGYSLAPDTALGSSTLIPDSSACRSDADLNGGLVDNPLAFAGDDPSLQIFLPTRPAESSVQHGSRDQTNVTNGICTEDWISLSLGGGASGSNGNASTQNGFNSGLQVPTRGAATNNMADTAASLLLGMNDDRSDKTSRPRSDNPFSFPRQKRSVRPRLYLSIDSESE* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0285 881 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Lan7g0285 881 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Lan7g0285 881 SUPERFAMILY FYVE/PHD zinc finger 108 170 IPR011011 -
Lan7g0285 881 SMART sap_9 11 45 IPR003034 -
Lan7g0285 881 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 448 IPR013083 -
Lan7g0285 881 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Lan7g0285 881 SMART PHD_3 115 167 IPR001965 -
Lan7g0285 881 MobiDBLite consensus disorder prediction 843 881 - -
Lan7g0285 881 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 816 - -
Lan7g0285 881 SUPERFAMILY SAP domain 1 64 IPR036361 -
Lan7g0285 881 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Lan7g0285 881 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Lan7g0285 881 MobiDBLite consensus disorder prediction 543 566 - -
Lan7g0285 881 Pfam SAP domain 14 41 IPR003034 -
Lan7g0285 881 Gene3D SAP domain 2 62 IPR036361 -
Lan7g0285 881 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 9 816 - -
Lan7g0285 881 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Lan7g0285 881 MobiDBLite consensus disorder prediction 803 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0285 Lan-Chr7 1828455 1838325 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan7g0285 zf-MIZ 2.7e-19 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0285 - - gmx:100793735 1439.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0285 7 1828455 1838325 Lan7g0285 7 1828455 1838325 ECH
Lan7g0285 7 1828455 1838325 Lan8g1681 8 23720187 23733356 LSH
Lan6g1951 6 30453127 30465397 Lan7g0285 7 1828455 1838325 PCT
Lan3g0076 3 514417 524418 Lan7g0285 7 1828455 1838325 PCT
Lan7g0285 7 1828455 1838325 Lan6g1951 6 30453127 30465397 PCT
Lan7g0285 7 1828455 1838325 Lan3g0076 3 514417 524418 PCT