Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0278 ATGGAGAATTGTGACACAAACACTACCCTTGCTTCTAATTCCTTATTATCTTCCCTTTCAGTTACTCCTCAAGTTGTATTGAGCCCTTGTGCTGCATGCAAGATTTTGAGAAGAAGATGTGCTCAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTCAACCTGCTAAATTTATCATTGCCCATCGTGTCTTTGGTGCCAGCAACATCATCAAGTTCTTACAGGAACTTGAAGAATCTGAAAGAGCTGATGCAGCGAGCAGCATGGTTTATGAGGCTACTGCAAGACTTAGAGACCCAATTTATGGTTGTGCAGGTGCAATTTGTCACCTCCAAAATCAGGTCAATGAGCTTGAAGCACAATTAGCGAAGGCACAAGCTGAGATTGTAAACATGCAAGTTCAGCAAACTAATCTTATGAATCTAATATGCATGGAAGCAGCACAAAGTCCACAGGAATTATCACCACAACAATCACTGGATAATTTCTATGAGGAGAACACTAGCCTATTATGGGAGCCTCTTTGGACATGA 534 0.4176 MENCDTNTTLASNSLLSSLSVTPQVVLSPCAACKILRRRCAQKCVLAPYFPPTQPAKFIIAHRVFGASNIIKFLQELEESERADAASSMVYEATARLRDPIYGCAGAICHLQNQVNELEAQLAKAQAEIVNMQVQQTNLMNLICMEAAQSPQELSPQQSLDNFYEENTSLLWEPLWT* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0278 177 Pfam Lateral organ boundaries (LOB) domain 29 126 IPR004883 -
Lan7g0278 177 ProSiteProfiles LOB domain profile. 28 129 IPR004883 -
Lan7g0278 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 164 - -
Lan7g0278 177 Coils Coil 108 135 - -
Lan7g0278 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 17 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0278 Lan-Chr7 1783379 1785118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0278 24 177 AS2 family AT1G07900 67.901 3.75e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan7g0278 LOB 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0278 - - lang:109353012 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0278 7 1783379 1785118 Lan7g0278 7 1783379 1785118 ECH
Lan7g0278 7 1783379 1785118 Lan13g0365 13 2443454 2445066 LSH
Lan6g1953 6 30474125 30475630 Lan7g0278 7 1783379 1785118 PCT
Lan10g0123 10 761942 763730 Lan7g0278 7 1783379 1785118 PCT
Lan7g0278 7 1783379 1785118 Lan6g1953 6 30474125 30475630 PCT
Lan7g0278 7 1783379 1785118 Lan10g0123 10 761942 763730 PCT