Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0273 ATGGACGGTGTGGGAGATTTTGCGGCGGTTCCAACGCACGGAGGACAGTTTATTCAGTATAATATATTCGGTAATCCGTTCGAGGTTACCACCAAGTATCGTCCTCCGATCATGCCTGTTGGTCGCGGCGCCTACGGAATTGTTTGCTCGCTGTTGAATACGGAGACTAATGAGTTGGTGGCAATTAAGAAGATATCAGATGCTTTTGATAATCATATGGACGCTAAGCGTACGCTCCGTGAGATTAAACTTCTCAGGCATTTGAATCACGAAAATATAATTGCTTTAAGAGATGTTATTCCTCCACCCTTGCGTAGAGAGTTTACTGATGTATACATAGTCACTGAACTTATGGATACTGACCTTCACCACATTATTCGCTCTAATCAAAATCTGTCAGAGGAACACTGCCAGTACTTCTTGTATCAGGTTCTTCGTGGATTAAAATATATACATTCTGCAAACATAATCCATAGAGATTTGAAACCAAGCAACCTGTTGCTGAATGCAAATTGTGACTTGAAGATTATTGATTTTGGTCTTGCCCGGCCAGCATTAGAAAGTGACTTCATGACTGAATATGTTGTCACGAGATGGTATAGGGCTCCCGAGTTGTTGTTGAACTCCTCTGATTACACTTCTGCCATAGATGTGTGGTCAGTTGGTTGCATCTTTATGGAGCTTATGAATAAAAAGCCTCTGCTTCCCGGTAGAGATCATGTGCATCAAATGCGCCTATTAACAGAGCTTCTTGGCACTCCAACTGAGGCTGACCTGGGGTTAGTGAGAAATGAGGATGTGAGAAGATATATCCGACAACTACCTCAATTTCCTCGCCAACCTTTAGCTGAGGTCTTCCCTCATGTTCACCCCTTAGCCATGGATCTCATTGATAAAATGTTGACAATTGACCCAACTAAAAGAATTACAGTTGAAGAAGCACTAGCCCATCCATACCTTGCAAAACTGCATGATGAGGGTGATGAACCAGTCAGCATGGAGCCATTCGCATTTGAATTTGAGCACCAACAATTGGATGAAGAGCAGATAAAAGAGATGATTTACAGGGAAGCATTGGCACTCAATCCTGAGTATGCTTAA 1101 0.4251 MDGVGDFAAVPTHGGQFIQYNIFGNPFEVTTKYRPPIMPVGRGAYGIVCSLLNTETNELVAIKKISDAFDNHMDAKRTLREIKLLRHLNHENIIALRDVIPPPLRREFTDVYIVTELMDTDLHHIIRSNQNLSEEHCQYFLYQVLRGLKYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPALESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLLPGRDHVHQMRLLTELLGTPTEADLGLVRNEDVRRYIRQLPQFPRQPLAEVFPHVHPLAMDLIDKMLTIDPTKRITVEEALAHPYLAKLHDEGDEPVSMEPFAFEFEHQQLDEEQIKEMIYREALALNPEYA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0273 366 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Lan7g0273 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 365 - -
Lan7g0273 366 SMART serkin_6 34 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0273 366 Pfam Protein kinase domain 39 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0273 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 365 - -
Lan7g0273 366 ProSitePatterns MAP kinase signature. 69 172 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan7g0273 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Lan7g0273 366 ProSiteProfiles Protein kinase domain profile. 34 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0273 366 Gene3D Transferase(Phosphotransferase) domain 1 118 347 - -
Lan7g0273 366 SUPERFAMILY Protein kinase-like (PK-like) 39 326 IPR011009 -
Lan7g0273 366 Gene3D Phosphorylase Kinase; domain 1 17 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0273 Lan-Chr7 1752510 1755430 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0273 6 366 MAP Kinase Gene Family AT3G45640 81.717 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan7g0273 Pkinase 3.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0273 K20536 - gmx:100801339 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0273 7 1752510 1755430 Lan7g0273 7 1752510 1755430 ECH
Lan7g0273 7 1752510 1755430 Lan8g1692 8 23793634 23796370 LSH
Lan7g0273 7 1752510 1755430 Lan13g0360 13 2399053 2402740 LSH