Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0271 ATGCCAAAGCGTGTGCGCTCTCTCAAACTCAAGTTTAAGTCTCATATAAGTCATAACCAAGTGAGTTTTCCTTCCCAACTCTTTAATTTGAATCTGAGAAAAGAAGAGATGGAAAATGAAAATGTAGATGAAAGTGAGAAAGTGAAAGGGGTTCCAATTCACGGAGGGAAGTTCATACGTTACAACATACTCGGCAACTTCTTCGATGTCTATCATAAATACGCTCCTCCAATTCAACCCGTTGGACGCGGCGCATACGGCATCGTTTGCTGTGCAACGAATTCGGAGACGAAAGAAAGGGTTGCAATAAAAAAAATTGGAAATGCTTTTGACAACAGGATTGATGCTAAGAGGACACTCAGAGAAATCAAACTCCTTTGTCACATGGATCACGATAACGTAATTAAAATCAAGGACATAATACAACCACCAGATAAGGAAAATTTCAATGATGTGTATATTGTATATGAACTGATGGATACTGACTTGCATCAGATTATACAGTCTAACCAGGCTCTCACTGATGAGCATTGTCAGTATTTTCTATATCAACTATTGAGAGGGTTGAAGTACATACACTCGGCAAATGTTCTGCACCGAGATTTAAAACCAAGCAATTTACTTCTCAATGCAAATTGTGATCTCAAAGTATGTGACTTTGGACTTGCCAGAACAACCTCTGAGACAGATTTTATGACAGAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAATTGCTACTGAATTGTTCAGAATATACTGCAGCTATTGACATATGGTCGGTTGGTTGCATTTTGATGGAGATAATTAAAAGGGAGCCTTTATTTCCTGGTAAAGATTATGTTCAACAGTTGGCACTTATAACTGAGTTGCTAGGTTCACCAGATGACTCAGATCTTGGATTTCTCAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCCCGCATGTTGAAAAACAGCCCTTTGCACAGAGTTTTGCTGATATGTCCCCTTTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTCGATCCCTCCAAACGCATAACTGTCGAGGAAGCACTGAATCACCCATACTTATCAAGTCTTCATGAGATCAATGAGGAGCCTACTTGTCCAACTCCTTTCATCTTTGATTTTGAACAAGCAACCCTGAATGAAGAAGATATAAAAGAGCTTATATGGAGGGAGTCTCTGAACTTCAGCCAGGATCAGAGGCTGGAGTAG 1230 0.3967 MPKRVRSLKLKFKSHISHNQVSFPSQLFNLNLRKEEMENENVDESEKVKGVPIHGGKFIRYNILGNFFDVYHKYAPPIQPVGRGAYGIVCCATNSETKERVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIIQPPDKENFNDVYIVYELMDTDLHQIIQSNQALTDEHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKVCDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIKREPLFPGKDYVQQLALITELLGSPDDSDLGFLRSDNAKKYVKQLPHVEKQPFAQSFADMSPLAIDLAEKMLVFDPSKRITVEEALNHPYLSSLHEINEEPTCPTPFIFDFEQATLNEEDIKELIWRESLNFSQDQRLE* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0271 409 CDD STKc_TEY_MAPK 68 403 - -
Lan7g0271 409 SUPERFAMILY Protein kinase-like (PK-like) 78 367 IPR011009 -
Lan7g0271 409 Coils Coil 27 47 - -
Lan7g0271 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lan7g0271 409 Gene3D Transferase(Phosphotransferase) domain 1 159 388 - -
Lan7g0271 409 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 52 407 - -
Lan7g0271 409 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0271 409 ProSitePatterns MAP kinase signature. 110 213 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan7g0271 409 ProSitePatterns Protein kinases ATP-binding region signature. 81 105 IPR017441 GO:0005524
Lan7g0271 409 Pfam Protein kinase domain 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0271 409 Gene3D Phosphorylase Kinase; domain 1 58 398 - -
Lan7g0271 409 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 52 407 - -
Lan7g0271 409 SMART serkin_6 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0271 Lan-Chr7 1738374 1742361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0271 50 402 MAP Kinase Gene Family AT1G07880 79.887 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan7g0271 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0271 K04371 - gmx:100802929 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0271 7 1738374 1742361 Lan7g0271 7 1738374 1742361 ECH