Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0268 ATGTATACTCACTACAATACCACAATTCCACGCGCCGCCGATTCCATCAGCTATGTTCCATCACCTCCGGATGCTACGACGGCATCACCAATGCACTTCTCCACCACTCTTCAGCAGCAACACTACCAACTGGGTATCGGCGAGTTGGACATGGTGCAACTCAACTCGGAGATGAGTTATAATAATAATAATAATAATCAGAATAGCAGTGGGAGTGGAGGAAGCAGCTATATGGGTTCGCCGAGTTCGATGGCGAGTTACGAGACTCAACGATTGATGCAAAGGAGCGTTAGCAGCCATTCGCTACCGAAGACAAATAATAATAATAATGGGCCCCACCATGCCTTTTCAGCTTTCTTTGCTGAGTTGCTTGAATCCTCACATGATGATGGTCCGGTGAGGAGAGTTTATAGTACCGGTGATCTCCATAGAATTAATGGAATGCAACATTATCATCATTCAGATAGTCCATTGTCAAGTGAAAGTAGTATGATCATAGAAGGAATGAACAGAGCCAGTCCTTATAGCCCAGAGGAGAAGAAGGCAAGGATTGAGAGATACAAAAGCAAGAGAAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGTAGGAAAACATTGGCAGATAGCAGGCCACGTATTAGAGGAAGATTTGCAAGGAATGATGAAATTGTAAGCAACCCTCAAGTTCAATGGAGCCATATTGGTGATGGAGAAGAAGCTGATGATGAAGATGAGAATTGGGACAATTTCTTTAATTCTATAGTTCCTGAAAGTCTGGATCATGAGCACCATTGCAGTAACGCTTTTGATGTATTATATTAA 828 0.4239 MYTHYNTTIPRAADSISYVPSPPDATTASPMHFSTTLQQQHYQLGIGELDMVQLNSEMSYNNNNNNQNSSGSGGSSYMGSPSSMASYETQRLMQRSVSSHSLPKTNNNNNGPHHAFSAFFAELLESSHDDGPVRRVYSTGDLHRINGMQHYHHSDSPLSSESSMIIEGMNRASPYSPEEKKARIERYKSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIVSNPQVQWSHIGDGEEADDEDENWDNFFNSIVPESLDHEHHCSNAFDVLY* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0268 275 PANTHER CCT MOTIF PROTEIN 46 275 - -
Lan7g0268 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 46 275 IPR045281 GO:0009909
Lan7g0268 275 MobiDBLite consensus disorder prediction 58 110 - -
Lan7g0268 275 Pfam CCT motif 181 222 IPR010402 GO:0005515
Lan7g0268 275 ProSiteProfiles CCT domain profile. 180 222 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0268 Lan-Chr7 1717750 1720045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0268 168 221 C2C2-CO-like Transcription Factor Family AT5G24930 51.852 1.30e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan7g0268 CCT 2.7e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0268 - - lang:109352757 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0268 7 1717750 1720045 Lan7g0268 7 1717750 1720045 ECH
Lan6g1962 6 30555214 30558128 Lan7g0268 7 1717750 1720045 PCT
Lan10g0112 10 651136 653310 Lan7g0268 7 1717750 1720045 PCT
Lan7g0268 7 1717750 1720045 Lan6g1962 6 30555214 30558128 PCT
Lan7g0268 7 1717750 1720045 Lan10g0112 10 651136 653310 PCT