Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0257 ATGGTTCATCAGGAATTCCGAAAAGGTCCATGGACAGAACAGGAGGACTTGAAGTTGGTCTCATTTGTAGGGTTGTTTGGAGATCGAAGGTGGGATTTTATAGCTAAGGTTTCAGGTTTGACTAGAACAGGTAAGAGTTGCAGGTTAAGGTGGGTTAATTACCTTCACCCTGGTCTCAAACATGGGAAGCTCACACCCCAAGAAGAACGCCTTGTCATGGAGCTTCACTCTAAATGGGGAAATAGATGGTCAAGAATTGCTCGAAAACTTCCCGGGCGCACAGACAATGAGATTAAGAATTATTGGAGGACTCACATGAGGAAGAAGGCACAGGAGGAAAAGCGTGCAGCTGCATCACCAACATCTTCAAGTTGTCAATCCTCACTATCCTCAAGTAATAATAATAATAATCATACTGTAAATTCAGTACATGCTTCCAAAAAAGCTGGAGAAGAAAGCTTTTATGACACAGGAGGGCCTAATAATAATGAAAATGCCTCAAATGGAAATATTAATGTTGGAGAAGATCACCAAGATGGTGAAGAAGGGTACTCTATGGATGATATATGGAAAGATATTGGCATGTTAGAAGAGAATATTCTTCCTTCTACATCTTGGGAGTATTCTTCAGAACCACTATGGATGATGGATGAAGAAGAAAGTAAGATGTTGTTCCCTTTAAGTGACCAATGTTTTTCCTGCTATGAACATGGCAGTGCATTTCTGACCGGTTAA 735 0.4068 MVHQEFRKGPWTEQEDLKLVSFVGLFGDRRWDFIAKVSGLTRTGKSCRLRWVNYLHPGLKHGKLTPQEERLVMELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQEEKRAAASPTSSSCQSSLSSSNNNNNHTVNSVHASKKAGEESFYDTGGPNNNENASNGNINVGEDHQDGEEGYSMDDIWKDIGMLEENILPSTSWEYSSEPLWMMDEEESKMLFPLSDQCFSCYEHGSAFLTG* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0257 244 Gene3D - 64 107 - -
Lan7g0257 244 CDD SANT 65 106 IPR001005 -
Lan7g0257 244 SMART sant 7 57 IPR001005 -
Lan7g0257 244 SMART sant 60 108 IPR001005 -
Lan7g0257 244 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Lan7g0257 244 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 221 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lan7g0257 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Lan7g0257 244 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Lan7g0257 244 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Lan7g0257 244 MobiDBLite consensus disorder prediction 107 185 - -
Lan7g0257 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lan7g0257 244 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lan7g0257 244 CDD SANT 10 55 IPR001005 -
Lan7g0257 244 MobiDBLite consensus disorder prediction 116 146 - -
Lan7g0257 244 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Lan7g0257 244 Gene3D - 8 60 - -
Lan7g0257 244 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 3 221 - -
Lan7g0257 244 MobiDBLite consensus disorder prediction 156 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0257 Lan-Chr7 1635367 1637006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0257 1 242 MYB Transcription Factor Family AT5G59780 55.894 3.53e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g0257 Myb_DNA-binding 3.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0257 K09422 - vvi:100260318 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0257 7 1635367 1637006 Lan7g0257 7 1635367 1637006 ECH
Lan7g0257 7 1635367 1637006 Lan6g1967 6 30601347 30602954 PCT