Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0246 ATGGCGAAGACACTGATTTCGTATTCATCTTCATTCATAGGAACACCGCTTCCTTCATTTCCTCGTCACTTCCACCACCGCACAACCACTAAAGTTAACTTCAGCTTCCACCATATTTCTCCAATTCAATCCATACATAACTCCATAGATTTCACCGAAATTGTTGCAAGAACTGAAGGCCTTCTATACACGCTCGCCGACGCCACCGTCGTAGCAGCAGATTCGGTTACAGCAGCTTCCGGCGATGCCACTGCTCAGAAGAACGGAGGCTGGTTCGGTTTTATCTCCGAAGCCATGGAATTTGTTCTTAAGGTGCTAAAGGACGGTCTTACAGCAGTGCACGTGCCTTACTCATATGGATTTGCTATTATATTGCTTACTCTCATTGTTAAGGCTGCTACACTTCCATTGACAAAGCAACAGGTTGAATCAACACTGGCTATGCAAAATCTTCAACCAAAACTTAAGGCCATTCAAGCAAGATATGCTGGCAACCAGGAAAGAATACAACTTGAGACATCAAGGCTATATAGCCAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACTTTGGCTACAATTCCAGTGTGGATTGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTATTAACAGAAGGTTTCCTTTGGATCCCATCTTTGGGTGGCCCTACTTCCATTGCAGCTAGGCAGAGTGGAGCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCATTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTTGTTTCTCAATTTGTTTCAATGGAAATCATGAAACCACCTCAGACAAATGATCCTAATCAGAAGAATTCACTTCTGATTTTAAAGTTTCTTCCTCTCATGATTGGTTACTTCTCACTGTCTGTCCCATCAGGGCTTACAATTTACTGGTTTATAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCTAGTGGAATTATCACTGCAGGACGTGCTAAAAGATCCGGTGAAAAGTTTAGGCAGTTTAAAGATGAGGAGAAAAAGAAAAAGTCCACCAAAGCACTGCTGGTGGAAGAAGTTCAACCTCTAGATTCTGCTTCTGATTCTGACAACGACTCAAATGAAGGAAGTGACCAGGGACAGGAAGTTGCAGAAGAATCTTATGCTTCTACAGTTAGCAAAGAGGTTCCAAGTTATTCTAGGGAAAGAAGAAGCAAGCGTTCAAAGCGGAAGCGCACTGTATAA 1311 0.4302 MAKTLISYSSSFIGTPLPSFPRHFHHRTTTKVNFSFHHISPIQSIHNSIDFTEIVARTEGLLYTLADATVVAADSVTAASGDATAQKNGGWFGFISEAMEFVLKVLKDGLTAVHVPYSYGFAIILLTLIVKAATLPLTKQQVESTLAMQNLQPKLKAIQARYAGNQERIQLETSRLYSQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQFVSMEIMKPPQTNDPNQKNSLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSGEKFRQFKDEEKKKKSTKALLVEEVQPLDSASDSDNDSNEGSDQGQEVAEESYASTVSKEVPSYSRERRSKRSKRKRTV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0246 436 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 430 - -
Lan7g0246 436 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 118 332 IPR028055 -
Lan7g0246 436 MobiDBLite consensus disorder prediction 386 418 - -
Lan7g0246 436 MobiDBLite consensus disorder prediction 372 436 - -
Lan7g0246 436 Pfam 60Kd inner membrane protein 119 333 IPR001708 GO:0016021|GO:0032977
Lan7g0246 436 PANTHER OXA1 1 430 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0246 Lan-Chr7 1549269 1554823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0246 28 382 Chloroplast and Mitochondria Gene Families AT2G28800 67.956 5.08e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0246 K03217 - gmx:100817173 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0246 7 1549269 1554823 Lan7g0246 7 1549269 1554823 ECH
Lan7g0246 7 1549269 1554823 Lan8g1715 8 23970434 23975508 LSH