Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0239 ATGGGTAACGGCGTCGGAAAGCTAACCGTGTGTTTCACCGGCAACGGTGGTCGCCGGCGGAGGCATCATGAAATATCCTCTTGTACAACGGAGCCATTAGACGAGGGTCTGGGCCACTCTTTCTGCTACGTTCGACCCGACCCGAGTCGTTTATCTTCTTCAAAAGTCCACTCTGAAGAAACGACGACGTTCGGAACAATTTCCGGTGCATCGGTGAGTGCAAACACTTCAACTCCACTCTCAACCGCTTTCGTAGACTTATATTCATACGGTTCAATCGATAGAGCCGCGGCTTTTGAATCTTCAACTTCTTTCGCTTCTCTACCTCTTCAACCAATACCCAAAGGTTTAATGAACTCGGGTCCTTTCTCCGGTAGCGTAACCGGTTTTCCCGGTTCGGGTCCTCTCGAGAGAGGGTTTTTATCCGGTCCGATAGAACGTGGGTTCATGTCCGGTCCGATTGAAAAGGATGTTAACGGTTCAGATCAGTTTCAGAGAAGCTTCTCTCATGGTGGACTAGGTTTAGTGTTCAAACCCAGAAAACAAAAGGGTCGTTGGATTCGGCTTCTTCAGAGAGCGATATCGAAGACACTTTCTCGTGGGCAGAACTCAATTGTTGCTCCTATCAAAGGTGTGATTGTGAAGGAACATGATTGGGTTGTTGCTACAGTGGAGAAGCAGAATCATAATGAGAATTTGACTGTGAATAGTGTGAATTTCAGTTGTGAGGGTAGTTTGGAAGACGATGATTCGATGGAAAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAGGATCGTGTTCACGTGGTGGTTTCAGAGGAACACGGTTGTGTTTTCGTGGGGATTTACGATGGTTTCAATGGCCCTGATGCACCTGATTACCTTCTATCGAATCTTTACACCTTTGTCCACAAAGAATTGAAGGGGTTGCTTTGGGATGATAATTCTGAACAAGTTGTTGTGAAAGAGAATCAGAATTTGGAAGTGCAAGATGATGATGGTGATTATTGTTCTCAGTGTTTTGATAATAACAACCGTCCTTGTACAAGTGGCAATGATGCATGCAGGGGAAAGAGGGTCAAAAACTGCAAGAATAAGTCCAAAGGTTCTGCGAAGATATGGGAGGAGAATCAGAGAAGGTGGAAGTGTGAATGGGATAGGGAAAGATTAGAGCTTGATAGAAGACTGAAGGAGCAATTAACTCGATCTGCATCAGGTGAGAAGAATATGAATACTAGCTCAGTCAACCATTTTGATGTGTTGGAAGCTCTTTCCAGGGCTTTGAGGAAAACTGAGGAGTCTTATTTGGATGTTGCTGATAAGATGGTCATGGAGAATCCTGAATTGGCTTTGATGGGTTCGTGTGTGCTTGTGATGTTAATGAAGGGGGAAGATGTTTATGTGATGAATGTTGGGGATAGTAGAGCTGTGTTGGCTCAGAAGGCAGAGCCTGATTATTGGCTTGGGAAGATTAGACAGGACTTGGAGAGGATCAATGAAGAAACCATGAATGATCTTGAATCCTGGGAAGATGCTGATAGATCAAACTTGGTTTCTACTTTAAGTGCTCTTCAGCTTACCAAGGATCATAGTACCAGTGTTGAAGAGGAAGTCCAGAGAATAAAAAAGGAACATCCGGATGATCCTAATGCAGTGGTAAATGATCGTGTTAAGGGTTCTCTGAAGGTTACCAGAGCATTTGGTGCAGGATTTCTCAAACAGCCCAAGTGGAATGATGCACTTCTAGAGATGTTTAGAATAGACTACGTTGGAACTTCTCCTTACATCAGCTGCCAACCATATCTAAAACACCACAGGTTAGGCCCTAAGGACAAATTTTTGATTCTATGCTCTGATGGGCTATATCAATACATGTCAAACGAACAAGCGGTTGCTGAAGTTGAGCTTTTCATCACATTGCAACCCGAGGGAGACCCTGCCCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCCGCAAAGAAAGCAGGTTTGGACTTCCACGAGTTGCTTGAAATCCCACAAGGTGATAGGCGTCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2109 0.4433 MGNGVGKLTVCFTGNGGRRRRHHEISSCTTEPLDEGLGHSFCYVRPDPSRLSSSKVHSEETTTFGTISGASVSANTSTPLSTAFVDLYSYGSIDRAAAFESSTSFASLPLQPIPKGLMNSGPFSGSVTGFPGSGPLERGFLSGPIERGFMSGPIEKDVNGSDQFQRSFSHGGLGLVFKPRKQKGRWIRLLQRAISKTLSRGQNSIVAPIKGVIVKEHDWVVATVEKQNHNENLTVNSVNFSCEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGCVFVGIYDGFNGPDAPDYLLSNLYTFVHKELKGLLWDDNSEQVVVKENQNLEVQDDDGDYCSQCFDNNNRPCTSGNDACRGKRVKNCKNKSKGSAKIWEENQRRWKCEWDRERLELDRRLKEQLTRSASGEKNMNTSSVNHFDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWEDADRSNLVSTLSALQLTKDHSTSVEEEVQRIKKEHPDDPNAVVNDRVKGSLKVTRAFGAGFLKQPKWNDALLEMFRIDYVGTSPYISCQPYLKHHRLGPKDKFLILCSDGLYQYMSNEQAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0239 702 SMART PP2C_4 250 691 IPR001932 -
Lan7g0239 702 PANTHER - 22 702 - -
Lan7g0239 702 Gene3D - 221 698 IPR036457 -
Lan7g0239 702 Coils Coil 494 514 - -
Lan7g0239 702 CDD PP2Cc 409 693 IPR001932 -
Lan7g0239 702 ProSiteProfiles PPM-type phosphatase domain profile. 249 693 IPR001932 -
Lan7g0239 702 PANTHER PROTEIN PHOSPHATASE 2C 22 702 IPR015655 GO:0004722|GO:0006470
Lan7g0239 702 Pfam Protein phosphatase 2C 413 649 IPR001932 -
Lan7g0239 702 SUPERFAMILY PP2C-like 263 694 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0239 Lan-Chr7 1492292 1495559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0239 1 702 PP2C-type Phosphatase Gene Family AT1G07630 67.316 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0239 - - gmx:100812903 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0239 7 1492292 1495559 Lan7g0239 7 1492292 1495559 ECH
Lan7g0239 7 1492292 1495559 Lan8g1721 8 24013574 24016236 LSH
Lan7g0239 7 1492292 1495559 Lan13g0327 13 2153622 2156977 LSH