Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0237 ATGGGACTCTGTTTCAGCTCCAAAACTAAACCTGGGACCCCATATAGCACTGGGTTAAGTTCAAAAGAAGTGAGTAGTGATGAAAAGGATGTCAGCATCCCAAGTAGTAAGATCTCAAAAGTCTTGGTGCCTCAAATTTCGCGGAGTGAGGGTGAGATATTGCAATCATCCAATCTAAAGAGCTTCACTTTAATAGAACTTAAGGCTGCCACCCGTAATTTCCGTCCAGATAGTGTGTTAGGAGTTGGTGGTTTTGGATCGGTGTTCAAAGGCTGGATTGATGAGCAGTCATTGGTTGCTGCTAAACCTGGCACCGGCATTGTTATTGCTGTTAAAAGACTTAATCAGGATGGCTTTCAAGGACACCAGGAGTGGTTGGCTGAAGTCAACTATCTAGGCCAACTTTCTTATCATCATCTAGTGAGGTTGATTGGGTATTGCCTTGAAGATGAACATCGTCTTCTTGTCTATGAATTTATGCCTCGTGGAAGCTTGGAGAATCATTTGTTCAGGAGAGGGTCATATTTTCAACCTCTTTCATGGAGCCTCCGTTTGAAGGTCGCTCTTGGTGCTGCCAAAGGTCTTGCATTTCTTCACAGTGCTGAAACCAAAGTCATATACCGAGATTTTAAAACTTCAAATATCTTGCTGGATTCAAATTATAACGCAAAACTTTGTGATTTTGGGCTGGCTAAGGATGGACCAACAGGTGACAAAAGTCATGTCTCCACCAGAGTAATGGGAACCTACGGATATGCAGCCCCCGAGTACATAGCCACTGGTCATCTCACTGCGAAGAGTGATGTGTTTAGTTTTGGAGTTGTCCTAATGGAAATGATATCAGGCTTAAAGGCTATTGACAAGAATAGACCATCTGGGCAACAAAGTTTGGTGGAATGGGGTAAGCAATACTTGACCAACAAACGTAAGATCTTGCATGTAATGGATAACAGACTTGAAGGCCAATATTCAATAGATGATGCCTTAAAGGTTTCTACCCTTGCTTTGAGATGCCTCTCAATAGAGTCCAAGTTGAGGCCAAACATGGATGAGGTTGTTACACTTTTGGAGCAGCTACAGGTTCCTGATGTAAATGGAGGAAATCGAAGGCGCGTTCGTAGAAGAAGTTCTCATGTTTGA 1140 0.4289 MGLCFSSKTKPGTPYSTGLSSKEVSSDEKDVSIPSSKISKVLVPQISRSEGEILQSSNLKSFTLIELKAATRNFRPDSVLGVGGFGSVFKGWIDEQSLVAAKPGTGIVIAVKRLNQDGFQGHQEWLAEVNYLGQLSYHHLVRLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSNYNAKLCDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYIATGHLTAKSDVFSFGVVLMEMISGLKAIDKNRPSGQQSLVEWGKQYLTNKRKILHVMDNRLEGQYSIDDALKVSTLALRCLSIESKLRPNMDEVVTLLEQLQVPDVNGGNRRRVRRRSSHV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0237 379 SUPERFAMILY Protein kinase-like (PK-like) 49 356 IPR011009 -
Lan7g0237 379 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0237 379 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Lan7g0237 379 MobiDBLite consensus disorder prediction 1 30 - -
Lan7g0237 379 Gene3D Transferase(Phosphotransferase) domain 1 160 370 - -
Lan7g0237 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lan7g0237 379 Pfam Protein tyrosine and serine/threonine kinase 78 355 IPR001245 GO:0004672|GO:0006468
Lan7g0237 379 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Lan7g0237 379 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 25 374 - -
Lan7g0237 379 PANTHER OS01G0588500 PROTEIN-RELATED 25 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0237 Lan-Chr7 1479810 1482627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0237 4 356 Glycoside Hydrolase AT3G07070 43.697 1.88e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan7g0237 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0237 - - gmx:100798404 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0237 7 1479810 1482627 Lan7g0237 7 1479810 1482627 ECH
Lan6g1979 6 30685185 30688226 Lan7g0237 7 1479810 1482627 PCT
Lan10g0093 10 545520 547881 Lan7g0237 7 1479810 1482627 PCT
Lan7g0237 7 1479810 1482627 Lan6g1979 6 30685185 30688226 PCT
Lan7g0237 7 1479810 1482627 Lan10g0093 10 545520 547881 PCT