Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0216 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGTCTTCCAATGTCAAATCTAACCTTCATGACTTATCTGATAATGATGATGGGACCAAGAATGAAAAGGATCCTTTTTCTGGGTTCACTGAGTACACCTTGGATCAACTCAAAGTTGCTACTTCAGGATTTTCACCTGACAACATTGTTTCTGAACATGGTGAGAAGGCTCCAAATGTTGTCTACAAAGGAATACTTGAAGATAATAAGTTGATTGCTGTGAAGCGCTTTAACAAATCAGCTTGGCCTGATTCTCGACAATTCATAGAGGAAGCAAAAGCAGTGGGGCTATTGAGGAACGAACGATTAGCTAATTTGGTTGGGTTTTGCTGTGAAGGAGAAGATAAATTGCTTGTTGCAGAGTTCATGCCCAATGAAACTCTCTCCAAACATCTTTTTCACTGGGAGAACCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATCTAGCACAAGCACTGGAATACTGCAGCAATAATGGAAGGGCATTGTACCATGATCTTCATGCTTATAGAATTTTGTTTGATCAGGATGGCAATCCTAGACTCTCCTGCTTTGGACTCATGAAAAACAGTAGAGATGGCAGAAGCTATAGCACAAATTTAGCTTTCACTCCTCCAGAGTACTTGAGGACAGGAAGAATCACCCCTGAAAGTGTAGTTTACAGTTTTGGCACCCTTTTGCTAGATCTTATGAGTGGGAAGCATATCCCACCCAGTCATGCACTTGAAATTATACGAGCCAAAAATTTCCAGTTGCTGATGGACTCAGGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTACAATATGAGCCTCGGGAGAGACCAAATGCCAAATCGCTTGTGACTGCTCTAACTCCTCTTCAGAAAGAAACTTCAGTATCATCATATGTTTTGATGGGCATAACAGAAGGGGGTGTATCACCAAAAGAAACAGTTTCGTTGACACCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTGACCGCAATACATGAAATGTTGGATAAGGTGGGCTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTTCAAATGTGGACAAATCAAATACAAGATACACTAAATTTTAAGAAGCATGGAGATTCTGCTTTTCATGCCATGGACTTCTCTACAGCCATTGACTGCTACACACAATTCATTGATAGCGGGACAATGGTATCACCAACTGTTTATGTGAGGCGAAGCTTATGCTACTTGATGAGTGACATGCCACAAGAAGCACTTGGAGATGCCATGCAGGCTCAGTCTGTATTTCCCACCTGGCCTACTGCATTCTATCTTCAAGCAGCTGCCCTCTTCGGCCTTGGCATGGACAATGATGCACAAGAAAGTCTAAAAGACGGCACGATGCTGGAGACCAGAAAACTTAGAAATTGA 1476 0.4221 MGARCSKFSLCWWSSNVKSNLHDLSDNDDGTKNEKDPFSGFTEYTLDQLKVATSGFSPDNIVSEHGEKAPNVVYKGILEDNKLIAVKRFNKSAWPDSRQFIEEAKAVGLLRNERLANLVGFCCEGEDKLLVAEFMPNETLSKHLFHWENQPMKWAMRLRVALYLAQALEYCSNNGRALYHDLHAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLMSGKHIPPSHALEIIRAKNFQLLMDSGLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVSSYVLMGITEGGVSPKETVSLTPFGEACSRRDLTAIHEMLDKVGYKDDEDVANELSFQMWTNQIQDTLNFKKHGDSAFHAMDFSTAIDCYTQFIDSGTMVSPTVYVRRSLCYLMSDMPQEALGDAMQAQSVFPTWPTAFYLQAAALFGLGMDNDAQESLKDGTMLETRKLRN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0216 491 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 491 - -
Lan7g0216 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Lan7g0216 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Lan7g0216 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Lan7g0216 491 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0216 491 Gene3D Tetratricopeptide repeat domain 384 491 IPR011990 GO:0005515
Lan7g0216 491 SUPERFAMILY Protein kinase-like (PK-like) 35 314 IPR011009 -
Lan7g0216 491 SUPERFAMILY TPR-like 388 486 IPR011990 GO:0005515
Lan7g0216 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0216 Lan-Chr7 1348852 1353139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0216 21 310 Glycoside Hydrolase AT3G07070 32.704 8.70e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan7g0216 PK_Tyr_Ser-Thr 7.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0216 - - gmx:732542 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0216 7 1348852 1353139 Lan7g0216 7 1348852 1353139 ECH
Lan7g0216 7 1348852 1353139 Lan13g0305 13 1999602 2003499 LSH