Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0211 ATGAGTTGGAACCCACATATGGAGGTCCATTACAATAGCATCAGCTATCCCTATAATACCGCAGGGAGCTTTATTGAATATTTTGAGGGTCTAACCTATGAACATGTCAACTTCATTTTTTCTGGTGCATCGCATGCTCAGGTGCCTGAGAGTTCCTACCCTTCAACTTCAAGCTTTCACAAGTTTGGACTATCTGAACTCGACGGTAATTCATACTATCGCTACGGTCATGGTTATGATGTAAACCATCATGAATCACCGACGGATGAGTATAGGAGGCCGTCAGAAAACTCATCGACAGCCAATGAACAGATGGCAGCAGCAAGTACACAATGGGGAGAAAGTGTAAACACGGACACACAAGACAATTCTATTGAACGTCCACGAAGACATCATGGTAATTCCAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCCGATGACATGACCTATGAGGAACTACTTGAATTAGGTGAGGCTGTTGGAACTCAGAGCCGTGGTCTCACCCAAGAACAGATTTCCTTGCTTCCAGTTTCGAAGTACAAGCGTGGTTTCTTCTTGAGGAAGAAGTCACGTGATGAAAGATGTGTTATTTGCCAGATGGAATATAAGCGAGGGGACAAGCGGATCTCTTTACCATGTAAACATATTTATCATGCCAGTTGTGGAAACAAATGGCTTAGCATCAATAAGGCATGTCCAGTATGTTATACAGAGGTGTTTGCAGACAAGTCAAAGCACACATAA 753 0.4263 MSWNPHMEVHYNSISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQVPESSYPSTSSFHKFGLSELDGNSYYRYGHGYDVNHHESPTDEYRRPSENSSTANEQMAAASTQWGESVNTDTQDNSIERPRRHHGNSNDYQVIWQDNIDPDDMTYEELLELGEAVGTQSRGLTQEQISLLPVSKYKRGFFLRKKSRDERCVICQMEYKRGDKRISLPCKHIYHASCGNKWLSINKACPVCYTEVFADKSKHT* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0211 250 ProSiteProfiles Zinc finger RING-type profile. 198 238 IPR001841 -
Lan7g0211 250 MobiDBLite consensus disorder prediction 78 136 - -
Lan7g0211 250 Pfam Ring finger domain 197 238 IPR001841 -
Lan7g0211 250 SMART ring_2 198 238 IPR001841 -
Lan7g0211 250 MobiDBLite consensus disorder prediction 93 122 - -
Lan7g0211 250 SUPERFAMILY RING/U-box 194 245 - -
Lan7g0211 250 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 248 - -
Lan7g0211 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 244 IPR013083 -
Lan7g0211 250 MobiDBLite consensus disorder prediction 78 92 - -
Lan7g0211 250 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 248 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0211 Lan-Chr7 1317948 1321797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0211 5 249 C3H Transcription Factor Family AT3G63530 42.400 5.77e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0211 K19045 - gmx:100793907 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0211 7 1317948 1321797 Lan7g0211 7 1317948 1321797 ECH
Lan7g0211 7 1317948 1321797 Lan8g1749 8 24176116 24179708 LSH