Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0206 ATGGAATCAGATCTTCGGCAACACCCTCCTATGTTGTTGGATCAGCAGCAGCAGATAAGTTCAGGCTTGACGCGATACCGGTCAGCTCCAAGTTCATATTTTTCAAATATAATAGACAACGAGTTCTATGAGAGCATATTCAATCGCCCCTCCAGCCCTGAAACAGAACGAGTTTTCGCTCGGTTTATGAATAGTCTTAGTGGTAGCGGTGGTAGTGGTGGTGGTGATGGCGCTGCGGATGATTCAGTTTCTACGAATATCCAACCGGTTCAGCAAGTTTCTGTTGTGAAGGAAGAGATTATTAACCAGCAATCTCAGGATATGCCTTCAATGAATAATGAACCACTGATTCTCCAGCAGCAGCAAAGTAATATCAACAATTATGGATCATCTAACCCTCAAAGTTTTTACCATAGCTCTGGAAGACCACCTTTGCCGAATCAGATGAAGACCGGTCGTGGAAGTACTTCTAGCCTTATCAGGCACGGTAGCTCCCCTGCTGGACTCTTTTCAAACATAAACATTGAAGGCTATGCTGCTATAAGAGGCATGGGGGCTTTGGGTGCTGCTAATAGCACTACCGAGGAAGCAAACTTTTCTCCTGCGGCAAGGTTGAAGAATGCACCAAACTACTCGCCAGGGCTAATGTCATCAAGAGGGGAAATTGGGAATGAAAGCAATAAACAAAACAACGCAGTTAATGAAGCCTTTGCTGAAAACCAAGGTAATGATTTCGTAGCAGGTTTGCCGGTAGGTCTTTGGGATGATTCTTCAGTCTTGGCTGATAATATAAGTGGCGTAAAAAGACCTAGAGACGATGATGTAAAACCATTTTCAGGTTTAAATGCAGCTGAAACTCTGAATGAAACAGTAGGCCAACCTTCTGCCCCTTTGGCTCACCAGTTGAGTATGCCAAATACTCCATTGGAAATGGCAGCCATTGAGAAGTTTCTTCACTCCTCAGATTCTGTTCCATGGAAGATTCGTGCCAAGCGTGGCTGCGCCACTCATCCAAGAAGTATTGCAGAGAGGGTTAGAAGAACTAAAATTAGTGAGCGAATGAGGAAACTACAAGATCTGGTCCCCAACATGGACAATCAAACAAACACTGCAGACATGTTGGACTTGGCTGTTGATTACATCAAAGACCTTCAAAAACAAGTTCAGACTCTTTCAGAAAGTCATGCTAAGTGTACGTGTTCACACAAGCAACATCAATAG 1221 0.439 MESDLRQHPPMLLDQQQQISSGLTRYRSAPSSYFSNIIDNEFYESIFNRPSSPETERVFARFMNSLSGSGGSGGGDGAADDSVSTNIQPVQQVSVVKEEIINQQSQDMPSMNNEPLILQQQQSNINNYGSSNPQSFYHSSGRPPLPNQMKTGRGSTSSLIRHGSSPAGLFSNINIEGYAAIRGMGALGAANSTTEEANFSPAARLKNAPNYSPGLMSSRGEIGNESNKQNNAVNEAFAENQGNDFVAGLPVGLWDDSSVLADNISGVKRPRDDDVKPFSGLNAAETLNETVGQPSAPLAHQLSMPNTPLEMAAIEKFLHSSDSVPWKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDNQTNTADMLDLAVDYIKDLQKQVQTLSESHAKCTCSHKQHQ* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0206 406 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 334 384 IPR011598 GO:0046983
Lan7g0206 406 SMART finulus 340 390 IPR011598 GO:0046983
Lan7g0206 406 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 337 399 IPR036638 GO:0046983
Lan7g0206 406 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 14 403 - -
Lan7g0206 406 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 14 403 - -
Lan7g0206 406 Gene3D - 335 406 IPR036638 GO:0046983
Lan7g0206 406 Pfam Helix-loop-helix DNA-binding domain 339 385 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0206 Lan-Chr7 1282813 1286037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0206 1 401 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 41.388 3.36e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan7g0206 HLH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0206 - - gmx:100803833 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0206 7 1282813 1286037 Lan7g0206 7 1282813 1286037 ECH
Lan7g0206 7 1282813 1286037 Lan8g1754 8 24217352 24220304 LSH