Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0150 ATGGCTTCCGGTGATGTTGAGTACCGTGCTTTCGTTGGTGGACTTGCATGGGCCACTGATAGTGAATCTCTCGAGAAGGCTTTCGCTCCCTATGGTGAAATTCTTGATGCTAAGATTATCAACGATCGTGAAACTGGAAGATCAAGAGGTTTCGGTTTTGTTACCTTCGCAACTGAGCAATCATTGAAAGACGCTATTGAGGGTTTGAACGGACAGGATCTTGATGGCCGTAACATCACCGTCAACGAGGCTCAATCCCGTGGTTCAGGTGGCGGCGGAGGCGGCGGCCGTGGTGGTGGCGGTTATGGAGGAGGTGGATATGGTGGAGGCCGCCGTGAAGGTGGTGGCGGTGGATACAACAGAAACGGAGGTGGTGGAGGATATGGTGGTGGTGGTGGTGGCGGTTATGGTGGTGGCAGGGATAGTGGCTATGGAGGTGAACGCTACTCTAGGGGTGGCGGTGAATCCGATGGAGGGTGGAGGAATTGA 489 0.5399 MASGDVEYRAFVGGLAWATDSESLEKAFAPYGEILDAKIINDRETGRSRGFGFVTFATEQSLKDAIEGLNGQDLDGRNITVNEAQSRGSGGGGGGGRGGGGYGGGGYGGGRREGGGGGYNRNGGGGGYGGGGGGGYGGGRDSGYGGERYSRGGGESDGGWRN* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0150 162 SMART rrm1_1 9 82 IPR000504 GO:0003723
Lan7g0150 162 MobiDBLite consensus disorder prediction 72 162 - -
Lan7g0150 162 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Lan7g0150 162 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
Lan7g0150 162 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 162 - -
Lan7g0150 162 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Lan7g0150 162 Gene3D - 2 104 IPR012677 -
Lan7g0150 162 PANTHER GEO13361P1-RELATED 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0150 Lan-Chr7 918675 919704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0150 11 81 Eukaryotic Initiation Factors Gene Family AT2G23350 45.070 5.04e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0150 - K13195 ccaj:109800369 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0150 7 918675 919704 Lan8g1788 8 24467485 24468556 LSH
Lan7g0150 7 918675 919704 Lan13g0236 13 1468180 1469294 LSH