Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0149 ATGTTGCAGTGTGTCAACACTACTGGGAATATAGGTGGAATATGTTCAGATATGACAGTGTTGGAAATTCAAAGAGGAAGGATGAAGTGTCAACAAGAAAACCAAGAAGAAGGGTTCTTTTGTGGAACTCAGTTTAACTCTTCTCATTGCGAAGATCTCATGATGATGATGGGTGATGGTGATTCACTGAAACCTGACCTTGGTTTGGAAAATGGATGGCCTGAATTGGGAAGGTTTAACATGGAATTCGGGTCTTCTATATTGCCACCTGCTTCTGGGTTTGATGTCAATTCTTCTATTTCAAGGACTTGTAGCAGAGACATGGCTTCACCAACGGAAATGAAAGAAACATTGAAGAAGAGGAAGCCTCAAAAAGCTCACAATTCCAAGGTTGTAGCAGAAAGTGTTAACAAAGAGAAGAAGATCAAAGTTAGTGGTGATGAAGAGGAATCCAACATGGCTGAGCTAGCCAGTAATAAGAATACAAAGGCAAACACAAGTAAGACCAACAAGGAAACTTGTGGTGAAAGTTCCAAGGAGAATTCAAAAGACTCTGAGGTTCAAAATCCAAAGCCTGATTACATTCATGTTCGGGCACGTCGTGGCCAAGCCACTGATAGTCACAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATTAGTGGGAGAATGAAATATTTGCAAGATTTAGTACCAGGTTGCAACAAAATCACAGGAAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCCCTTCAACGACAAGTTGAGTTCTTGTCAATGAAATTAGCTGCTGTAAACCCAAGACTTGACTTCAACATTGATGATTTGTTTGCCAAAGAGGTATTCCCTGCTTGTTCTCCAAGATTTCCGAACACAGGGATGCAATCAGACATAACTACTAACCCTGCCTATCTTCAATTCAATCCAGCACAACTTGTTTCATGTTTTGGTGGATTATTAAACATGGGAATAAACCCTTCAGATGTGGCTCTTAGAAGGACCACCAGGGCACCTGCACCTTTACCTGAATCATTTATTGACTCGTCATCTTGTTTCACCCAAATTTTACCTTCCTCGACTTGGGAAGGTGATTTCCAAAACCTTTACAATAATGTGAATTTTGATCAAGCACGAACAGCATCATTTCCTTCTCAACCATTAACAGGTGTAGTTGACACTAGCAATCTAAAGATGGAGATGTAG 1209 0.4012 MLQCVNTTGNIGGICSDMTVLEIQRGRMKCQQENQEEGFFCGTQFNSSHCEDLMMMMGDGDSLKPDLGLENGWPELGRFNMEFGSSILPPASGFDVNSSISRTCSRDMASPTEMKETLKKRKPQKAHNSKVVAESVNKEKKIKVSGDEEESNMAELASNKNTKANTSKTNKETCGESSKENSKDSEVQNPKPDYIHVRARRGQATDSHSLAERVRREKISGRMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDDLFAKEVFPACSPRFPNTGMQSDITTNPAYLQFNPAQLVSCFGGLLNMGINPSDVALRRTTRAPAPLPESFIDSSSCFTQILPSSTWEGDFQNLYNNVNFDQARTASFPSQPLTGVVDTSNLKMEM* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0149 402 MobiDBLite consensus disorder prediction 132 154 - -
Lan7g0149 402 CDD bHLH_AtBPE_like 193 278 - -
Lan7g0149 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 253 IPR011598 GO:0046983
Lan7g0149 402 Pfam Helix-loop-helix DNA-binding domain 207 254 IPR011598 GO:0046983
Lan7g0149 402 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 60 382 - -
Lan7g0149 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 201 272 IPR036638 GO:0046983
Lan7g0149 402 MobiDBLite consensus disorder prediction 173 191 - -
Lan7g0149 402 MobiDBLite consensus disorder prediction 155 172 - -
Lan7g0149 402 SMART finulus 209 259 IPR011598 GO:0046983
Lan7g0149 402 MobiDBLite consensus disorder prediction 102 191 - -
Lan7g0149 402 Gene3D - 200 274 IPR036638 GO:0046983
Lan7g0149 402 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 60 382 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0149 Lan-Chr7 907755 910896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0149 9 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 37.436 1.68e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan7g0149 HLH 9.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0149 - - gmx:100794256 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0149 7 907755 910896 Lan8g1791 8 24490985 24494049 LSH
Lan7g0149 7 907755 910896 Lan13g0233 13 1436082 1439328 LSH