Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0142 ATGGCTCTAGGGTTTCTCCTTCTCTATAATCTGCTGCTACATTCTTGCGCTTGCGCCTCTTCCTCAAACCCTTTCTTCAGAAATCATCTCATGGCTCCAAAGAAGGAAAAAGCTCCACCACCTTCATCCAAACCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTGCTGTTCGATCAGGCTTCATATGACAAGCTCCTCACTGAAGCACCTAAGTTCAAGCTCATCACTCCTTCCATTCTTTCTGATCGTTTGAGGGTTAATGGATCACTTGCAAGGAAGGCTATCAGGGACTTGATGGCAAGAGGTTCAATCAGGTTGGTGTCTGCCCACTCAAGTCAGCAGATTTACACCAGAGCTACAAACACCTAA 417 0.4676 MALGFLLLYNLLLHSCACASSSNPFFRNHLMAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLTEAPKFKLITPSILSDRLRVNGSLARKAIRDLMARGSIRLVSAHSSQQIYTRATNT* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0142 138 Gene3D - 51 138 - -
Lan7g0142 138 PANTHER BNAA04G12260D PROTEIN 19 138 - -
Lan7g0142 138 MobiDBLite consensus disorder prediction 31 63 - -
Lan7g0142 138 PANTHER 40S RIBOSOMAL PROTEIN S25 19 138 IPR004977 -
Lan7g0142 138 Pfam S25 ribosomal protein 37 135 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0142 Lan-Chr7 860073 861712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0142 31 137 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 89.720 5.28e-53 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0142 K02975 - fve:101301719 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0142 7 860073 861712 Lan8g1797 8 24526408 24528299 LSH
Lan7g0142 7 860073 861712 Lan13g0223 13 1393817 1395732 LSH