Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0130 ATGAAGATCCAGTGTGATGTGTGTCACAAAGAGGAAGCCTCTGTGTTCTGTTCTTCAGATGAAGCTGCTCTTTGCCATGCATGTGATAATCACATCCACCATATTAACAAGCTTGCAAGAAAACACACACGCTTCTCTCTTCACAACACCATCTCCAAACACACACCTATTTGTGATATCTGCCAAGAGATGCATGCATATGTATTTTGCAGAGAGGATAGAGCAATAATCTGCACAAAATGTGACCTTTCTATCCATGAAGTGAATGAACATACCCAGAAACATAACAGGTTTTTTCTCACTGGTGTAAAGCTTGGTGCTTCTTCTACAGATTCAACATCATCACTATGCTCAAATGACACTGCAAGTGCCTCAGAAATAAGAACCTCTAGTTCTAAAACAAACAATATTAGTAGTGAAACGGGTTCGGTTTCAACAAGTAGCATTTCTGAATACTTGACTGAAACCATACCTGGTTACTGCATGGAAGATCTTCTTGATGCTTCTTTTGCACCAAATGGTTTCTATAATATTTGA 537 0.3892 MKIQCDVCHKEEASVFCSSDEAALCHACDNHIHHINKLARKHTRFSLHNTISKHTPICDICQEMHAYVFCREDRAIICTKCDLSIHEVNEHTQKHNRFFLTGVKLGASSTDSTSSLCSNDTASASEIRTSSSKTNNISSETGSVSTSSISEYLTETIPGYCMEDLLDASFAPNGFYNI* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0130 178 SMART bboxneu5 53 100 IPR000315 GO:0008270
Lan7g0130 178 SMART bboxneu5 4 47 IPR000315 GO:0008270
Lan7g0130 178 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 176 - -
Lan7g0130 178 CDD Bbox1_BBX-like 57 100 - -
Lan7g0130 178 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lan7g0130 178 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Lan7g0130 178 CDD Bbox1_BBX-like 5 47 - -
Lan7g0130 178 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 176 - -
Lan7g0130 178 Pfam B-box zinc finger 56 92 IPR000315 GO:0008270
Lan7g0130 178 Gene3D Classic Zinc Finger 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0130 Lan-Chr7 787731 788891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0130 1 175 C2C2-CO-like Transcription Factor Family AT1G75540 46.078 2.17e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lan7g0130 zf-B_box 6.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0130 - - lang:109353034 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0130 7 787731 788891 Lan8g1810 8 24603008 24604413 LSH
Lan7g0130 7 787731 788891 Lan13g0210 13 1316222 1317977 LSH